RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 SCAMP3O14828 347 aaKnown RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 SPATA31D3P0C874 917 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 IDH3AP50213 366 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 SCNN1BP51168 640 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 PTPRCAPQ14761 206 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 SPATA31D4Q6ZUB0 917 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 DNAJC1Q96KC8 554 aaKnown RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 DDX50Q9BQ39 737 aaKnown RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 CCDC106Q9BWC9 280 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 S1PR4O95977 384 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 CR2P20023 1033 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 CYTH1Q15438 398 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 SLC14A2Q15849 920 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 HERC6Q8IVU3 1022 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 PEX13Q92968 403 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 PAWRQ96IZ0 340 aaKnown RBP28.61■■■□□ 2.17
SAMD1-202ENST00000533683 MUC3BQ9H195 1237 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 FAM96AQ9H5X1 160 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 PLXNA4Q9HCM2 1894 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 INSIG1O15503 277 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 ACRP10323 421 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 USP4Q13107 963 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 LAMB3Q13751 1172 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 TSNAXIP1Q2TAA8 658 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 RNF135Q8IUD6 432 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 SPNS2Q8IVW8 549 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 HEXDCQ8WVB3 486 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 ACSS2Q9NR19 701 aa28.61■■■□□ 2.17
SAMD1-202ENST00000533683 APOBEC2Q9Y235 224 aaKnown RBP28.61■■■□□ 2.17
SAMD1-202ENST00000533683 GRIA4P48058 902 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 VWA5B1Q5TIE3 1220 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 RINLQ6ZS11 566 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 LMNTD2Q8IXW0 634 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 CADM1Q9BY67 442 aaKnown RBP28.6■■■□□ 2.17
SAMD1-202ENST00000533683 CDH19Q9H159 772 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 IL21Q9HBE4 155 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 DLX3O60479 287 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 C1RP00736 705 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 ENO1P06733 434 aaKnown RBP28.6■■■□□ 2.17
SAMD1-202ENST00000533683 MNAT1P51948 309 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 ZXDBP98169 803 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 TXNDC8Q6A555 127 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 ARL14EPQ8N8R7 260 aaPredicted RBP28.6■■■□□ 2.17
SAMD1-202ENST00000533683 FAM13CQ8NE31 585 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 OR13C4Q8NGS5 318 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 ADAMTS19Q8TE59 1207 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 YME1L1Q96TA2 773 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 MRPL46Q9H2W6 279 aaKnown RBP28.6■■■□□ 2.17
SAMD1-202ENST00000533683 IGSF5Q9NSI5 407 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 TAS2R1Q9NYW7 299 aa28.6■■■□□ 2.17
SAMD1-202ENST00000533683 CHUKO15111 745 aa28.59■■■□□ 2.17
SAMD1-202ENST00000533683 LILRB3O75022 631 aa28.59■■■□□ 2.17
SAMD1-202ENST00000533683 PRKAA2P54646 552 aa28.59■■■□□ 2.17
SAMD1-202ENST00000533683 UBAP2LQ14157 1087 aaKnown RBP28.59■■■□□ 2.17
SAMD1-202ENST00000533683 HECTD2Q5U5R9 776 aa28.59■■■□□ 2.17
SAMD1-202ENST00000533683 MAGEC3Q8TD91 643 aa28.59■■■□□ 2.17
SAMD1-202ENST00000533683 DRC3Q9H069 523 aa28.59■■■□□ 2.17
SAMD1-202ENST00000533683 GREM1O60565 184 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 GOT2P00505 430 aaKnown RBP28.58■■■□□ 2.17
SAMD1-202ENST00000533683 CHRNGP07510 517 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 NAGLUP54802 743 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 ARF5P84085 180 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 FSCBQ5H9T9 825 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 MRPL57Q9BQC6 102 aaKnown RBP28.58■■■□□ 2.17
SAMD1-202ENST00000533683 C11orf49Q9H6J7 331 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 SCUBE2Q9NQ36 999 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 VWA7Q9Y334 891 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 PRR5-ARHGAP8B1AHC4 643 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 GYG2O15488 501 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 TBL1XO60907 577 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 ARHGAP8P85298 464 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 CSHL1Q14406 222 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 COG4Q9H9E3 785 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.58■■■□□ 2.177e-7■□□□□ 9.3
SAMD1-202ENST00000533683 SORCS3Q9UPU3 1222 aa28.58■■■□□ 2.17
SAMD1-202ENST00000533683 CCDC162PA2VCL2 907 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 EFCAB14O75071 495 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 RPP40O75818 363 aaKnown RBP28.57■■■□□ 2.16
SAMD1-202ENST00000533683 GLP2RO95838 553 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 CD160O95971 181 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 PRLP01236 227 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 CCR10P46092 362 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 TBCCQ15814 346 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 ITIH5Q86UX2 942 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 TDRD5Q8NAT2 981 aaKnown RBP28.57■■■□□ 2.16
SAMD1-202ENST00000533683 TTC8Q8TAM2 541 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 TSPAN17Q96FV3 270 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 ILKAPQ9H0C8 392 aaPredicted RBP28.57■■■□□ 2.16
SAMD1-202ENST00000533683 RIMKLBQ9ULI2 386 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 MAFFQ9ULX9 164 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 SPO11Q9Y5K1 396 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 OBSL1O75147 1896 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 CARNS1A5YM72 827 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 GSC2O15499 205 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 SNAP91O60641 907 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 DIAPH2O60879 1101 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 LATS1O95835 1130 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 OLFM2O95897 454 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 HDCP19113 662 aa28.57■■■□□ 2.16
SAMD1-202ENST00000533683 PPM1AP35813 382 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms