RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 ZNF487B1APH4 448 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 H0Y8X5 98 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 KCNK1O00180 336 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 VILLO15195 856 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 MATN3O15232 486 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 LZTS3O60299 673 aaPredicted RBP11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 MAGEC1O60732 1142 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 PAK4O96013 591 aaPredicted RBP11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 CPP00450 1065 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 JCHAINP01591 159 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 WNT1P04628 370 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 CCNB1P14635 433 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 CCNCP24863 283 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 CETN2P41208 172 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 CDKN2BP42772 138 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 CCT8P50990 548 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 CLDN2P57739 230 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 BNC1Q01954 994 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 DSC2Q02487 901 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 NSUN2Q08J23 767 aaKnown RBP eCLIP11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 SLC10A2Q12908 348 aaPredicted RBP11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 UGP2Q16851 508 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 LRRK1Q38SD2 2015 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 TFDP3Q5H9I0 405 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 DENND2CQ68D51 928 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 SLC9A4Q6AI14 798 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 PSAPL1Q6NUJ1 521 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 B4GALNT4Q76KP1 1039 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 PEX26Q7Z412 305 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 SYCE1Q8N0S2 351 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 P3H4Q92791 437 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 NUDCD1Q96RS6 583 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 MGME1Q9BQP7 344 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 C1QTNF7Q9BXJ2 289 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 CEP41Q9BYV8 373 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 SLC32A1Q9H598 525 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 TM7SF3Q9NS93 570 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 SAE1Q9UBE0 346 aaPredicted RBP11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 GUCA1BQ9UMX6 200 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 ZFR2Q9UPR6 939 aaKnown RBP11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 ATP8A1Q9Y2Q0 1164 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 COQ6Q9Y2Z9 468 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 PCDHB9Q9Y5E1 797 aa11.56□□□□□ -0.56
UBASH3B-208ENST00000533451 A0A0U1RQJ8 604 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 GRID2IPA4D2P6 1211 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 A6NNZ2 444 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 BTNL10A8MVZ5 291 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 TLR4O00206 839 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 FPGTO14772 594 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 AREL1O15033 823 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 GPR37O15354 613 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 PJA2O43164 708 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 ARHGAP6O43182 974 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 SPINT1O43278 529 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 TM7SF2O76062 418 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 FTCDO95954 541 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 PEX11BO96011 259 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 ELFN1P0C7U0 828 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 THEGLP0DJG4 465 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 NFKBIAP25963 317 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 CTNNA2P26232 953 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 CTNNA1P35221 906 aaKnown RBP11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 CTSKP43235 329 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 ARRB1P49407 418 aaPredicted RBP11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 SUOXP51687 545 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 EPHB1P54762 984 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 POLR2LP62875 67 aaKnown RBP11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 PPIDQ08752 370 aaKnown RBP11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 HNRNPDQ14103 355 aaKnown RBP11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 TMEM259Q4ZIN3 620 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 ZC3H18Q86VM9 953 aaKnown RBP11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 ZSWIM9Q86XI8 627 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 VSIG1Q86XK7 387 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 UBL4BQ8N7F7 174 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 MFSD2AQ8NA29 543 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 EXD1Q8NHP7 514 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 HDAC11Q96DB2 347 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 TSGA10Q9BZW7 698 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 DNAAF2Q9NVR5 837 aaKnown RBP11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 AMFRQ9UKV5 643 aa11.55□□□□□ -0.56
UBASH3B-208ENST00000533451 hCG_1818297A0A087WSY0 165 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 A0A1W2PR77 199 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 TSPAN11A1L157 253 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 CCDC66A2RUB6 948 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 KRT86O43790 486 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 HLA-DQB2P05538 268 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 CCDC175P0C221 793 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 C6P13671 934 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 PECAM1P16284 738 aaPredicted RBP11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 TGM2P21980 687 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 CA4P22748 312 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 LIG3P49916 1009 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 THOP1P52888 689 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 RWDD2BP57060 319 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 NXPH1P58417 271 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 TRAF2Q12933 501 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 SUZ12Q15022 739 aaKnown RBP11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 ACOX1Q15067 660 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 FAM182AQ5T1J6 154 aa11.54□□□□□ -0.56
UBASH3B-208ENST00000533451 ARMC12Q5T9G4 340 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms