RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PIH1D2Q8WWB5 315 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 KLK6Q92876 244 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 TADA1Q96BN2 335 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 IMP4Q96G21 291 aaKnown RBP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 RBM15Q96T37 977 aaKnown RBP eCLIP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 VAT1Q99536 393 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 C1QTNF2Q9BXJ5 285 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 TDRD1Q9BXT4 1180 aaKnown RBP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 SLC25A51Q9H1U9 297 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 USP29Q9HBJ7 922 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 CAPN10Q9HC96 672 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 DMTF1Q9Y222 760 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 IGLON5A6NGN9 336 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 KHNYNO15037 678 aaKnown RBP12.06□□□□□ -0.48
SSBP3-214ENST00000533209 SLC31A1O15431 190 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 KIF5CO60282 957 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 CEP104O60308 925 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 MMP20O60882 483 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 ATP1A1P05023 1023 aaKnown RBP12.06□□□□□ -0.48
SSBP3-214ENST00000533209 CFIP05156 583 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 NFKB1P19838 968 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
SSBP3-214ENST00000533209 CXCR5P32302 372 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 MMP12P39900 470 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 POLR2LP62875 67 aaKnown RBP12.06□□□□□ -0.48
SSBP3-214ENST00000533209 RACK1P63244 317 aaKnown RBP12.06□□□□□ -0.48
SSBP3-214ENST00000533209 FAM193AP78312 1265 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 SEMG2Q02383 582 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 RALGDSQ12967 914 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 SIX1Q15475 284 aaPredicted RBP12.06□□□□□ -0.48
SSBP3-214ENST00000533209 SETMARQ53H47 684 aaPredicted RBP12.06□□□□□ -0.48
SSBP3-214ENST00000533209 ARMC12Q5T9G4 340 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 NAPEPLDQ6IQ20 393 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 ERAP2Q6P179 960 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 PRR23CQ6ZRP0 262 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 DPPA4Q7L190 304 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 ZSCAN30Q86W11 494 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 KIAA2013Q8IYS2 634 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 PAF1Q8N7H5 531 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 SPATA22Q8NHS9 363 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 ATG4AQ8WYN0 398 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 SERAC1Q96JX3 654 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 SLC6A18Q96N87 628 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 WRAP53Q9BUR4 548 aaKnown RBP12.06□□□□□ -0.48
SSBP3-214ENST00000533209 FSCN3Q9NQT6 498 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 RXFP3Q9NSD7 469 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 B4GALT6Q9UBX8 382 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 TRHDEQ9UKU6 1024 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 DNPEPQ9ULA0 475 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 PHTF1Q9UMS5 762 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 SLC6A14Q9UN76 642 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 CHKBQ9Y259 395 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 PPIL1Q9Y3C6 166 aa12.06□□□□□ -0.48
SSBP3-214ENST00000533209 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.06□□□□□ -0.48
SSBP3-214ENST00000533209 CEP192Q8TEP8 1941 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 A0A1W2PR77 199 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 LNP1A1A4G5 178 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 PRR5-ARHGAP8B1AHC4 643 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 KCNN4O15554 427 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 LIASO43766 372 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 FGGP02679 453 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 WNT1P04628 370 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 CSNK1EP49674 416 aaKnown RBP12.05□□□□□ -0.48
SSBP3-214ENST00000533209 AFF3P51826 1226 aaKnown RBP12.05□□□□□ -0.48
SSBP3-214ENST00000533209 BNC1Q01954 994 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 PTPRRQ15256 657 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 SLC14A2Q15849 920 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 LAYNQ6UX15 382 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 LIPIQ6XZB0 460 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 PID1Q7Z2X4 250 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 TMEM145Q8NBT3 493 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 CXorf40AQ8TE69 158 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 ASB12Q8WXK4 309 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 SMIM14Q96QK8 99 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 MCCC1Q96RQ3 725 aaPredicted RBP12.05□□□□□ -0.48
SSBP3-214ENST00000533209 TRIB3Q96RU7 358 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 FERMT1Q9BQL6 677 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 NUSAP1Q9BXS6 441 aaKnown RBP12.05□□□□□ -0.48
SSBP3-214ENST00000533209 SLC17A9Q9BYT1 436 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 PCDH9Q9HC56 1237 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 AASDHPPTQ9NRN7 309 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 KCND1Q9NSA2 647 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 KLHL8Q9P2G9 620 aaPredicted RBP12.05□□□□□ -0.48
SSBP3-214ENST00000533209 CA5BQ9Y2D0 317 aa12.05□□□□□ -0.48
SSBP3-214ENST00000533209 CFAP54Q96N23 3096 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 A0A1B0GVT2 93 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 CFAP69A5D8W1 941 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 NPIPB15A6NHN6 443 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 A8MX80 341 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 F5H423 210 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 PRAMEF26H0Y7S4 382 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 RAD51BO15315 384 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 GDF9O60383 454 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 FOXD2O60548 495 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 ZNF189O75820 626 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 PAK4O96013 591 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 MT-CYBP00156 380 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 CTPS1P17812 591 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 HNRNPA2B1P22626 353 aaKnown RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 CA4P22748 312 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms