RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 USH1CQ9Y6N9 552 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 IRF8Q02556 426 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 CARD16Q5EG05 197 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 SUGP1Q8IWZ8 645 aaKnown RBP15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 PCYOX1LQ8NBM8 494 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 GBA3Q9H227 469 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 TMBIM4Q9HC24 238 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 GDF3Q9NR23 364 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 EVPLLA8MZ36 301 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 FUT11Q495W5 492 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 GPRIN1Q7Z2K8 1008 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 BBS7Q8IWZ6 715 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 TAGAPQ8N103 731 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 TBATAQ96M53 351 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 DPEP2Q9H4A9 486 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 POMKQ9H5K3 350 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 MRPL40Q9NQ50 206 aaKnown RBP15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 CIDEBQ9UHD4 219 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 ZNF839A8K0R7 811 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 HNRNPA1P09651 372 aaKnown RBP eCLIP15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 IFI35P80217 286 aaPredicted RBP15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 FAM45BPQ6NSW5 357 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 RGS9BPQ6ZS82 235 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 FAM45AQ8TCE6 357 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 ACDQ96AP0 544 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 CASD1Q96PB1 797 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 HGH1Q9BTY7 390 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 THUMPD3Q9BV44 507 aaKnown RBP15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 HERC2P3Q9BVR0 1158 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 NDE1Q9NXR1 346 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 SH3BP4Q9P0V3 963 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 EFR3BQ9Y2G0 817 aa15.8■□□□□ 0.12
PPFIA1-222ENST00000532504 SERPINB5P36952 375 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 MLLT6P55198 1093 aaPredicted RBP15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 ZNF662Q6ZS27 426 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 APTXQ7Z2E3 356 aaKnown RBP15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 HID1Q8IV36 788 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 NKAPQ8N5F7 415 aaKnown RBP15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 ABHD8Q96I13 439 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 LIMD1Q9UGP4 676 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 PHTF1Q9UMS5 762 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 V9GYQ6 96 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 HOXB2P14652 356 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 HOXB8P17481 243 aaPredicted RBP15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 PROZP22891 400 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 LSP1P33241 339 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 SPAM1P38567 509 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 PRIM2P49643 509 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 EML3Q32P44 896 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 EPN3Q9H201 632 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 ZBTB42B2RXF5 422 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 RFXAPO00287 272 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 KPNA5O15131 536 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 ATP5HO75947 161 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 PRAMEF1O95521 474 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 NTAN1Q96AB6 310 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 ADAM7Q9H2U9 754 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 C6orf203Q9P0P8 240 aaPredicted RBP15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 BACE2Q9Y5Z0 518 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 RNF103-CHMP3A0A140T963 221 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 HEPACAM2A8MVW5 462 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 E9PBE3 544 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 KLHL41O60662 606 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 TRIM13O60858 407 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 CNTN5O94779 1100 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 LTA4HP09960 611 aaKnown RBP15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 MAGEA10P43363 369 aaPredicted RBP15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 CLCN5P51795 746 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 DPYSL2Q16555 572 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 AHI1Q8N157 1196 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 OR56A4Q8NGH8 313 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 STAG3L4Q8TBR4 150 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 PARVBQ9HBI1 364 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 OGDHLQ9ULD0 1010 aa15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 MTO1Q9Y2Z2 717 aaKnown RBP15.79■□□□□ 0.12
PPFIA1-222ENST00000532504 BCLAF3A2AJT9 711 aaKnown RBP15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 QSOX1O00391 747 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 EDN1P05305 212 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 TFEBP19484 476 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 MAPK1P28482 360 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 TAF11Q15544 211 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 LYPLAL1Q5VWZ2 237 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 TAS1R1Q7RTX1 841 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 LRRC34Q8IZ02 419 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 LRRC57Q8N9N7 239 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 CAVIN3Q969G5 261 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 OTULINQ96BN8 352 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 AHSPQ9NZD4 102 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 KIF17Q9P2E2 1029 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 ANKDD1BA6NHY2 528 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 MAGEC1O60732 1142 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 LCA5LO95447 670 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 SLC10A7Q0GE19 358 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 KRT72Q14CN4 511 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 MS4A13Q5J8X5 152 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 GALNT13Q8IUC8 556 aa15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 PIWIL1Q96J94 861 aaKnown RBP15.78■□□□□ 0.12
PPFIA1-222ENST00000532504 ACTR5Q9H9F9 607 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms