RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 STAP1Q9ULZ2 295 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 MAN2B2Q9Y2E5 1009 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 SPTBN1Q01082 2364 aaKnown RBP9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 GTPBP10A4D1E9 387 aaKnown RBP9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 GOLGA8SH3BPF8 625 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 AGRPO00253 132 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 INSIG1O15503 277 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 ZSCAN12O43309 604 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 SUV39H1O43463 412 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 GSRP00390 522 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 F9P00740 461 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 RPLP0P05388 317 aaKnown RBP9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 ANXA6P08133 673 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 FAM87AP0C7U9 286 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 CYP11B1P15538 503 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 ITIH1P19827 911 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 KRT9P35527 623 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 SCNN1AP37088 669 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 ETV5P41161 510 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 HK3P52790 923 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 CYP4F2P78329 520 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 CCL7P80098 99 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 SLC20A2Q08357 652 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 EXOC3L4Q17RC7 722 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 WSCD2Q2TBF2 565 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 MYLK3Q32MK0 819 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 CDKAL1Q5VV42 579 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 SPECC1LQ69YQ0 1117 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 HIST2H2BCQ6DN03 193 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 GBP6Q6ZN66 633 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 RAB11FIP2Q7L804 512 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 VASH2Q86V25 355 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 SDR16C5Q8N3Y7 309 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 RYBPQ8N488 228 aaPredicted RBP9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 ARL10Q8N8L6 244 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 HTR3CQ8WXA8 447 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 TSACCQ96A04 125 aaPredicted RBP9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 PDXPQ96GD0 296 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 PSMG3-AS1Q96PY0 264 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 WRAP53Q9BUR4 548 aaKnown RBP9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 L2HGDHQ9H9P8 463 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 FANCLQ9NW38 375 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 FOXJ2Q9P0K8 574 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 SIRPGQ9P1W8 387 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 DNAI1Q9UI46 699 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 COQ6Q9Y2Z9 468 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 FBN2P35556 2912 aa9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 ZNF106Q9H2Y7 1883 aaKnown RBP9.3□□□□□ -0.92
CHMP4A-205ENST00000531158 PRAMEF33A0A0G2JMD5 474 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 A0A1B0GTH6 734 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 CXorf51AA0A1B0GTR3 108 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 NEMP1O14524 444 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 PRAMEF10O60809 474 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 GJB6O95452 261 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 TIMP2P16035 220 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 CCKBRP32239 447 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 RPIAP49247 311 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 ARSDP51689 593 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 YPEL5P62699 121 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 NOMO3P69849 1222 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 ATP11AP98196 1134 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 NRG1Q02297 640 aaPredicted RBP9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 PPARDQ03181 441 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 PTK2BQ14289 1009 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 C15orf59Q2T9L4 293 aaPredicted RBP9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 MIIPQ5JXC2 388 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 FAXCQ5TGI0 409 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 GDPD4Q6W3E5 623 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 NOP9Q86U38 636 aaKnown RBP9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 ZSWIM9Q86XI8 627 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 DTX1Q86Y01 620 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 TMEM139Q8IV31 216 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 FBXO39Q8N4B4 442 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 CCDC185Q8N715 623 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 TMEM35BQ8NCS4 154 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 GPR156Q8NFN8 814 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 JOSD2Q8TAC2 188 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 PMEPA1Q969W9 287 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 C18orf8Q96DM3 657 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 FAM81BQ96LP2 452 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 NAA15Q9BXJ9 866 aaKnown RBP9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 CPEB1Q9BZB8 566 aaKnown RBP9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 EDEM3Q9BZQ6 932 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 SLC13A1Q9BZW2 595 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 TMEM248Q9NWD8 314 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 GULP1Q9UBP9 304 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 LHX3Q9UBR4 397 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 PISDQ9UG56 409 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 OR12D3Q9UGF7 316 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 RWDD2AQ9UIY3 292 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 OR1A2Q9Y585 309 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 PCDHGA4Q9Y5G9 962 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 FHOD1Q9Y613 1164 aa9.29□□□□□ -0.92
CHMP4A-205ENST00000531158 BLACEA4D250 179 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 C9orf172C9J069 976 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 TM7SF2O76062 418 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 TMCC1O94876 653 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 LRIG2O94898 1065 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 SLU7O95391 586 aaKnown RBP9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 PIGNO95427 931 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms