RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 HPCAL4Q9UM19 191 aa5.75□□□□□ -1.49
CD44-231ENST00000531110 DDX19BQ9UMR2 479 aa5.75□□□□□ -1.49
CD44-231ENST00000531110 DNAJC16Q9Y2G8 782 aa5.75□□□□□ -1.49
CD44-231ENST00000531110 MROH7-TTC4A0A0A0MT08 1334 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 SMARCA4P51532 1647 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 C1orf232A0A0U1RR37 186 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 LRRC72A6NJI9 287 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 AQP7P3A6NL99 342 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 CLCA1A8K7I4 914 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 RHPN2P1A8MT19 583 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 TMEM233B4DJY2 109 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 ANKRD65E5RJM6 399 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 K7ENM7 598 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 IFIT3O14879 490 aaKnown RBP5.74□□□□□ -1.49
CD44-231ENST00000531110 PPM1DO15297 605 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 RASA4O43374 803 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 STX10O60499 249 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 PALMO75781 387 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 SNAPINO95295 136 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 POP4O95707 220 aaKnown RBP5.74□□□□□ -1.49
CD44-231ENST00000531110 CRYZL1O95825 349 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 SERPINC1P01008 464 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 CHRNA1P02708 482 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 ANXA2P07355 339 aaKnown RBP5.74□□□□□ -1.49
CD44-231ENST00000531110 RHOP08100 348 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 P4HA1P13674 534 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 ATF6P18850 670 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 MUTP22033 750 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 EEF1GP26641 437 aaKnown RBP5.74□□□□□ -1.49
CD44-231ENST00000531110 TNFRSF8P28908 595 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 PCSK6P29122 969 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 GNA11P29992 359 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 CHKAP35790 457 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 TM4SF4P48230 202 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 PLCD1P51178 756 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 CASP5P51878 434 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 VBP1P61758 197 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 GNGT1P63211 74 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 HTRA4P83105 476 aaPredicted RBP5.74□□□□□ -1.49
CD44-231ENST00000531110 CDC20Q12834 499 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 STK38Q15208 465 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 ALX1Q15699 326 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 NPY5RQ15761 445 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 TBCCQ15814 346 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 PTGISQ16647 500 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 RILPL1Q5EBL4 403 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 C3orf38Q5JPI3 329 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 DUS1LQ6P1R4 473 aaKnown RBP5.74□□□□□ -1.49
CD44-231ENST00000531110 CEP85Q6P2H3 762 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 CFAP161Q6P656 301 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 ANKRD16Q6P6B7 361 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 KRT27Q7Z3Y8 459 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 ZNF280BQ86YH2 543 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 MMAAQ8IVH4 418 aaKnown RBP5.74□□□□□ -1.49
CD44-231ENST00000531110 TERB1Q8NA31 727 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 CCDC63Q8NA47 563 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 ATAD1Q8NBU5 361 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 GPR150Q8NGU9 434 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 RP9Q8TA86 221 aaKnown RBP5.74□□□□□ -1.49
CD44-231ENST00000531110 HCAR2Q8TDS4 363 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 SOCS4Q8WXH5 440 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 HSPH1Q92598 858 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 NELL1Q92832 810 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 RBM18Q96H35 190 aaKnown RBP5.74□□□□□ -1.49
CD44-231ENST00000531110 ZNF668Q96K58 619 aaPredicted RBP5.74□□□□□ -1.49
CD44-231ENST00000531110 OPALINQ96PE5 141 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 BBS4Q96RK4 519 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 OLFM1Q99784 485 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 SYT15Q9BQS2 421 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 TRIM15Q9C019 465 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 ZCWPW1Q9H0M4 648 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 CHST8Q9H2A9 424 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 VPS37BQ9H9H4 285 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 GLOD4Q9HC38 313 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 TRIM36Q9NQ86 728 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 RHBDL2Q9NX52 303 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 AMACRQ9UHK6 382 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 SERTAD3Q9UJW9 196 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 DNAJC12Q9UKB3 198 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 TLK1Q9UKI8 766 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 SNX7Q9UNH6 387 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 GTF2A1LQ9UNN4 478 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 AGTPBP1Q9UPW5 1226 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 ABCC12Q96J65 1359 aa5.74□□□□□ -1.49
CD44-231ENST00000531110 KDM5CP41229 1560 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 TIAM1Q13009 1591 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 JCADQ9P266 1359 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.73□□□□□ -1.49
CD44-231ENST00000531110 A8MVJ9 347 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 GOLGA8SH3BPF8 625 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 CNOT3O75175 753 aaKnown RBP5.73□□□□□ -1.49
CD44-231ENST00000531110 PROP1O75360 226 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 PDE5AO76074 875 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 UFL1O94874 794 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 TTLL1O95922 423 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 MT-ND5P03915 603 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 IL6RP08887 468 aaPredicted RBP5.73□□□□□ -1.49
CD44-231ENST00000531110 PRKAR1AP10644 381 aa5.73□□□□□ -1.49
CD44-231ENST00000531110 EEF2P13639 858 aaKnown RBP5.73□□□□□ -1.49
CD44-231ENST00000531110 GAP43P17677 238 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms