RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 OR56A1Q8NGH5 318 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 STYXQ8WUJ0 223 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 SNRNP27Q8WVK2 155 aaKnown RBP7.28□□□□□ -1.24
SVIP-204ENST00000530199 ESR2Q92731 530 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 CUL5Q93034 780 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 ZNF668Q96K58 619 aaPredicted RBP7.28□□□□□ -1.24
SVIP-204ENST00000530199 PIGSQ96S52 555 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 MNTQ99583 582 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 SORBS1Q9BX66 1292 aaKnown RBP7.28□□□□□ -1.24
SVIP-204ENST00000530199 FSCN3Q9NQT6 498 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 ECHDC1Q9NTX5 307 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 AGPAT5Q9NUQ2 364 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 CTTNBP2NLQ9P2B4 639 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 BOD1L1Q8NFC6 3051 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 ADAMTS9Q9P2N4 1935 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 CCDC78A2IDD5 438 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 ARL5CA6NH57 179 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 CAPN14A8MX76 684 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 TRIM38O00635 465 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 GPR42O15529 346 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 CCNE2O96020 404 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 EGR1P18146 543 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 DRD1P21728 446 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 P2RY2P41231 377 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 ZNF134P52741 427 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 LILRA4P59901 499 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 ITGB3BPQ13352 177 aaPredicted RBP7.27□□□□□ -1.25
SVIP-204ENST00000530199 POSTNQ15063 836 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 MAPKAPK3Q16644 382 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 ITPRIPL2Q3MIP1 535 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 ZIK1Q3SY52 487 aaPredicted RBP7.27□□□□□ -1.25
SVIP-204ENST00000530199 CYP4A22Q5TCH4 519 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 VPS53Q5VIR6 699 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 ARL6IP4Q66PJ3 421 aaKnown RBP7.27□□□□□ -1.25
SVIP-204ENST00000530199 SPOCD1Q6ZMY3 1216 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 MFSD6Q6ZSS7 791 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 KCTD20Q7Z5Y7 419 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 ZNF410Q86VK4 478 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 SGMS1Q86VZ5 419 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 CIR1Q86X95 450 aaPredicted RBP7.27□□□□□ -1.25
SVIP-204ENST00000530199 IQCA1Q86XH1 822 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 KRT73Q86Y46 540 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 C1QL4Q86Z23 238 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 TSTD1Q8NFU3 115 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 ZNF483Q8TF39 744 aaPredicted RBP7.27□□□□□ -1.25
SVIP-204ENST00000530199 CHFRQ96EP1 664 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 MED15Q96RN5 788 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 FNBP1Q96RU3 617 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 MXRA8Q9BRK3 442 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 TRIM4Q9C037 500 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 PCDHAC1Q9H158 963 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 FAM83DQ9H4H8 585 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.27□□□□□ -1.25
SVIP-204ENST00000530199 MAD2L2Q9UI95 211 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.27□□□□□ -1.25
SVIP-204ENST00000530199 CDY1Q9Y6F8 540 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 KNTC1P50748 2209 aa7.27□□□□□ -1.25
SVIP-204ENST00000530199 GON4LQ3T8J9 2241 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 DNHD1Q96M86 4753 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 A0A1B0GTW7 788 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 FAM149AA5PLN7 773 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 AQP7P3A6NL99 342 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 GOLGA6L6A8MZA4 724 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 PLK4O00444 970 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 RRP9O43818 475 aaKnown RBP7.26□□□□□ -1.25
SVIP-204ENST00000530199 TADA2AO75478 443 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 SUN1O94901 812 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 TNFRSF6BO95407 300 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 EGFP01133 1207 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 ITGA5P08648 1049 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 LRPAP1P30533 357 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 APOBEC3AP31941 199 aaPredicted RBP7.26□□□□□ -1.25
SVIP-204ENST00000530199 OR1D2P34982 312 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 UCNP55089 124 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 LOXL3P58215 753 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 UBXN11Q5T124 520 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 RAP1GAP2Q684P5 730 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 JMJD6Q6NYC1 403 aaPredicted RBP7.26□□□□□ -1.25
SVIP-204ENST00000530199 MIS18BP1Q6P0N0 1132 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 LAYNQ6UX15 382 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.26□□□□□ -1.25
SVIP-204ENST00000530199 DBX2Q6ZNG2 339 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 TMPRSS12Q86WS5 348 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 CCDC28AQ8IWP9 274 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 PAF1Q8N7H5 531 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 RPLP0P6Q8NHW5 317 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 FGF11Q92914 225 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 LRRC3BQ96PB8 259 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 GPR87Q9BY21 358 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 TPSD1Q9BZJ3 242 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 RNF41Q9H4P4 317 aaPredicted RBP7.26□□□□□ -1.25
SVIP-204ENST00000530199 ITM2CQ9NQX7 267 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 MIOSQ9NXC5 875 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 MTRRQ9UBK8 725 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 HEMK1Q9Y5R4 338 aaPredicted RBP7.26□□□□□ -1.25
SVIP-204ENST00000530199 ATXN2Q99700 1313 aaKnown RBP7.26□□□□□ -1.25
SVIP-204ENST00000530199 LRBAP50851 2863 aa7.26□□□□□ -1.25
SVIP-204ENST00000530199 NID2Q14112 1375 aa7.25□□□□□ -1.25
SVIP-204ENST00000530199 DIRC3C9JPN6 131 aa7.25□□□□□ -1.25
SVIP-204ENST00000530199 E7ENX8 843 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms