RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	TRDMT1	O14717	391 aa	Known RBP	14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	RAMP2	O60895	175 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	TBL1X	O60907	577 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	SNRPA	P09012	282 aa	Known RBP	14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	ANPEP	P15144	967 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	ACTR3	P61158	418 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	BASP1	P80723	227 aa	Known RBP	14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	SLC12A1	Q13621	1099 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	NOMO1	Q15155	1222 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	EML3	Q32P44	896 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	TEX44	Q53QW1	395 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	LGSN	Q5TDP6	509 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	TMCO4	Q5TGY1	634 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	PTCRA	Q6ISU1	281 aa	Predicted RBP	14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	ALYREF	Q86V81	257 aa	Known RBP	14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	SCUBE1	Q8IWY4	988 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	FAM71D	Q8N9W8	422 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	FAM83C	Q9BQN1	747 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	MAGEH1	Q9H213	219 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	C1orf21	Q9H246	121 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	C10orf88	Q9H8K7	445 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	ETAA1	Q9NY74	926 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	SAE1	Q9UBE0	346 aa	Predicted RBP	14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	SORCS3	Q9UPU3	1222 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	TBC1D30	Q9Y2I9	924 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	PLLP	Q9Y342	182 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	HEY1	Q9Y5J3	304 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	WNT6	Q9Y6F9	365 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	WASF2	Q9Y6W5	498 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	ILVBL	A1L0T0	632 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	ARHGAP42	A6NI28	874 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	TRIM49D1	C9J1S8	452 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	HOXC11	O43248	304 aa	Predicted RBP	14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	MTSS1	O43312	755 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	TSPAN3	O60637	253 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	FKBP6	O75344	327 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	KRT37	O76014	449 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	PENK	P01210	267 aa	Predicted RBP	14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	RBP3	P10745	1247 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	PRKCH	P24723	683 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	CRABP2	P29373	138 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	MAGEA6	P43360	314 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	RPS24	P62847	133 aa	Known RBP	14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	HTR4	Q13639	388 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	HSF5	Q4G112	596 aa	Predicted RBP	14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	ALF	Q53S48	1182 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	RNF220	Q5VTB9	566 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	FOXB2	Q5VYV0	432 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	TIGD7	Q6NT04	549 aa	Predicted RBP	14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	AAGAB	Q6PD74	315 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	PARM1	Q6UWI2	310 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	TPGS1	Q6ZTW0	290 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	TFAP2D	Q7Z6R9	452 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	TREML1	Q86YW5	311 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	RIN3	Q8TB24	985 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	DTX3L	Q8TDB6	740 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	RSPRY1	Q96DX4	576 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	RTP4	Q96DX8	246 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	MTBP	Q96DY7	904 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	SIKE1	Q9BRV8	207 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	CCDC106	Q9BWC9	280 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	BBS2	Q9BXC9	721 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	IQCG	Q9H095	443 aa	Known RBP	14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	DTL	Q9NZJ0	730 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	IL1RAPL1	Q9NZN1	696 aa		14.72	□□□□□ -0.05
NR1H3-231	ENST00000529540	CXorf51A	A0A1B0GTR3	108 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	BIRC5	O15392	142 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	MFSD11	O43934	449 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	SNN	O75324	88 aa	Predicted RBP	14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	PIAS1	O75925	651 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	CNTN5	O94779	1100 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	RHOC	P08134	193 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	AP2B1	P63010	937 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	BST1	Q10588	318 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	WASHC5	Q12768	1159 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	POLD3	Q15054	466 aa	Predicted RBP	14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	DHCR24	Q15392	516 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	ANO4	Q32M45	955 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	ARTN	Q5T4W7	220 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	C1orf228	Q6PIY5	440 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	RIPOR1	Q6ZS17	1223 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	CDKL3	Q8IVW4	592 aa	Predicted RBP	14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	CFAP52	Q8N1V2	620 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	RBM15B	Q8NDT2	890 aa	Known RBP	14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	PHC3	Q8NDX5	983 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	FIBIN	Q8TAL6	211 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	FGF14	Q92915	247 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	HDAC11	Q96DB2	347 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	OLFM3	Q96PB7	478 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	TRIM4	Q9C037	500 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	KIAA1522	Q9P206	1035 aa	Predicted RBP	14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	PAK5	Q9P286	719 aa		14.71	□□□□□ -0.05
NR1H3-231	ENST00000529540	SZT2	Q5T011	3432 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	C2CD4D	B7Z1M9	353 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	SCAMP3	O14828	347 aa	Known RBP	14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	ENO1	P06733	434 aa	Known RBP	14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	SERPINA6	P08185	405 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	PIM1	P11309	404 aa	Predicted RBP	14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	ADH5	P11766	374 aa		14.71	□□□□□ -0.06
NR1H3-231	ENST00000529540	HOXD9	P28356	352 aa	Predicted RBP	14.71	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms