RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 JCHAINP01591 159 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 PRKCGP05129 697 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 CEACAM1P13688 526 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 ITIH2P19823 946 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 CTNNA1P35221 906 aaKnown RBP13.48□□□□□ -0.25
CAPN1-215ENST00000528396 CDKN2BP42772 138 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 EPHB1P54762 984 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 CLDN2P57739 230 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 IL9RQ01113 521 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 SLC10A2Q12908 348 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-215ENST00000528396 ZNF423Q2M1K9 1284 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 PRAMEF14Q5SWL7 426 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 ARMC12Q5T9G4 340 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 PEX26Q7Z412 305 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 PGBD5Q8N414 524 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 TEX26Q8N6G2 289 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 UBL4BQ8N7F7 174 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 TMEM145Q8NBT3 493 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 LRRN4Q8WUT4 740 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 ASB12Q8WXK4 309 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 MAML1Q92585 1016 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 ANP32BQ92688 251 aaKnown RBP13.48□□□□□ -0.25
CAPN1-215ENST00000528396 P3H4Q92791 437 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 FATE1Q969F0 183 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 TSGA10Q9BZW7 698 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 SALL4Q9UJQ4 1053 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 AMFRQ9UKV5 643 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 PCDHGB2Q9Y5G2 931 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 HS3ST3A1Q9Y663 406 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 DCHS1Q96JQ0 3298 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 CABIN1Q9Y6J0 2220 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 KCNK1O00180 336 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 FLRT2O43155 660 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 ARHGAP6O43182 974 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 SPINT1O43278 529 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 SH3BP5O60239 455 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 ITGAVP06756 1048 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 ELFN1P0C7U0 828 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 C6P13671 934 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 CD59P13987 128 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 TGM2P21980 687 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 CTNNA2P26232 953 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 MMP12P39900 470 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 RABIFP47224 123 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 MARCKSL1P49006 195 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 LIG3P49916 1009 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 THOP1P52888 689 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 RWDD2BP57060 319 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 COPS2P61201 443 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 SEMG2Q02383 582 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 PPIDQ08752 370 aaKnown RBP13.47□□□□□ -0.25
CAPN1-215ENST00000528396 TMEM52BQ4KMG9 183 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 NPNTQ6UXI9 565 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 KYAT3Q6YP21 454 aaKnown RBP13.47□□□□□ -0.25
CAPN1-215ENST00000528396 GCNT7Q6ZNI0 430 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 Q6ZSR6 202 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 USP45Q70EL2 814 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 DCP2Q8IU60 420 aaKnown RBP13.47□□□□□ -0.25
CAPN1-215ENST00000528396 DENND6BQ8NEG7 585 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 OR13H1Q8NG92 308 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 RHBDD1Q8TEB9 315 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 KRT35Q92764 455 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 VOPP1Q96AW1 172 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 ECHDC3Q96DC8 303 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 LENG8Q96PV6 779 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-215ENST00000528396 FERMT1Q9BQL6 677 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 ERVMER34-1Q9H9K5 563 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 GRPEL1Q9HAV7 217 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 PCDHA3Q9Y5H8 950 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 RAI2Q9Y5P3 530 aa13.47□□□□□ -0.25
CAPN1-215ENST00000528396 CEP295Q9C0D2 2601 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 hCG_1818297A0A087WSY0 165 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 A0A1B0GTQ1 180 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 GRID2IPA4D2P6 1211 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 A8MX80 341 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 TRAFD1O14545 582 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-215ENST00000528396 KRT86O43790 486 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 HLA-DQB2P05538 268 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 CYP2A6P11509 494 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-215ENST00000528396 CR2P20023 1033 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 GRK6P43250 576 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 SIM1P81133 766 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-215ENST00000528396 DSC2Q02487 901 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 TRAF2Q12933 501 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 LRRC14Q15048 493 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 ACOX1Q15067 660 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 HS1BP3Q53T59 392 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 DPPA4Q7L190 304 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 PIP4P1Q86T03 277 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 ZSWIM9Q86XI8 627 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 TFB1MQ8WVM0 346 aaKnown RBP13.46□□□□□ -0.25
CAPN1-215ENST00000528396 HAUS1Q96CS2 278 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 HEMGNQ9BXL5 484 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 PHTF1Q9UMS5 762 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 COQ6Q9Y2Z9 468 aa13.46□□□□□ -0.25
CAPN1-215ENST00000528396 DNAH14Q0VDD8 3507 aa13.45□□□□□ -0.26
CAPN1-215ENST00000528396 POM121BA6NF01 834 aa13.45□□□□□ -0.26
CAPN1-215ENST00000528396 MIF4GDA9UHW6 222 aaKnown RBP13.45□□□□□ -0.26
CAPN1-215ENST00000528396 GIPC1O14908 333 aa13.45□□□□□ -0.26
CAPN1-215ENST00000528396 RAD51BO15315 384 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms