RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 TRPM6Q9BX84 2022 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 PCDH18Q9HCL0 1135 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 DNAJC28Q9NX36 388 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 TOR4AQ9NXH8 423 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 NLGN3Q9NZ94 848 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 ACACAQ13085 2346 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 POM121BA6NF01 834 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 EIF4E1BA6NMX2 242 aaKnown RBP9.68□□□□□ -0.86
CHD7-208ENST00000528280 TPP1O14773 563 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 INSIG1O15503 277 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 LZTS3O60299 673 aaPredicted RBP9.68□□□□□ -0.86
CHD7-208ENST00000528280 SOCS5O75159 536 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 PIAS2O75928 621 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 PROSCO94903 275 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 TMEM253P0C7T8 217 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 JUPP14923 745 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 NME1P15531 152 aaKnown RBP9.68□□□□□ -0.86
CHD7-208ENST00000528280 MX2P20592 715 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 ACP1P24666 158 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 IL1R2P27930 398 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 MAN1A1P33908 653 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 PDE1CQ14123 709 aaPredicted RBP9.68□□□□□ -0.86
CHD7-208ENST00000528280 FGL2Q14314 439 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 ZNF235Q14590 738 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 SMTNL2Q2TAL5 461 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 CAMK1DQ8IU85 385 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 VSTM4Q8IW00 320 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 RHOT2Q8IXI1 618 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 SLC25A45Q8N413 288 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 FAM181AQ8N9Y4 354 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 SCG3Q8WXD2 468 aaKnown RBP9.68□□□□□ -0.86
CHD7-208ENST00000528280 SPOCK2Q92563 424 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 FATE1Q969F0 183 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 ECHDC3Q96DC8 303 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 MYOCQ99972 504 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 SLC13A1Q9BZW2 595 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 FZD3Q9NPG1 666 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 PCDH12Q9NPG4 1184 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 GPR27Q9NS67 375 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 SPASTQ9UBP0 616 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 AMACRQ9UHK6 382 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 SALL4Q9UJQ4 1053 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 INTUQ9ULD6 942 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 CA5BQ9Y2D0 317 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 ATP8A1Q9Y2Q0 1164 aa9.68□□□□□ -0.86
CHD7-208ENST00000528280 COL5A1P20908 1838 aaPredicted RBP9.68□□□□□ -0.86
CHD7-208ENST00000528280 AKR1B15C9JRZ8 316 aaPredicted RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 PDE2AO00408 941 aaPredicted RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 RAD51BO15315 384 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 SIGLEC6O43699 453 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 BUB1BO60566 1050 aaPredicted RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 MAFKO60675 156 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 PIGNO95427 931 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 GP1BAP07359 652 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 HOXC4P09017 264 aaPredicted RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 JUNDP17535 347 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 KELP23276 732 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 CCNCP24863 283 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 RPIAP49247 311 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 LIG3P49916 1009 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 DAB2P98082 770 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 SLC25A11Q02978 314 aaKnown RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 SLC10A7Q0GE19 358 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 FZD2Q14332 565 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 PAFAH1B3Q15102 231 aaKnown RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 IFI16Q16666 785 aaKnown RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 ASTE1Q2TB18 679 aaPredicted RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 PROX2Q3B8N5 592 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 CCDC157Q569K6 752 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 ODF2Q5BJF6 829 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 ZFYVE27Q5T4F4 411 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 FAXCQ5TGI0 409 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 LVRNQ6Q4G3 990 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 LURAP1LQ8IV03 231 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 ATPAF2Q8N5M1 289 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 NPWQ8N729 165 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 TPCN2Q8NHX9 752 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 VOPP1Q96AW1 172 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 BTBD6Q96KE9 485 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 EXOC2Q96KP1 924 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 NUDCD1Q96RS6 583 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 IL12RB2Q99665 862 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 ZNF670Q9BS34 389 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 WRAP53Q9BUR4 548 aaKnown RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 MAK16Q9BXY0 300 aaKnown RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 CCDC86Q9H6F5 360 aaKnown RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 NHEJ1Q9H9Q4 299 aaPredicted RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 LUC7LQ9NQ29 371 aaKnown RBP9.67□□□□□ -0.86
CHD7-208ENST00000528280 SCUBE2Q9NQ36 999 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 ABHD10Q9NUJ1 306 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 DKK4Q9UBT3 224 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 PHTF1Q9UMS5 762 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 NENFQ9UMX5 172 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 TMEM131Q92545 1883 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 KALRNO60229 2985 aa9.67□□□□□ -0.86
CHD7-208ENST00000528280 ZNF487B1APH4 448 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 AQP9O43315 295 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 SDC3O75056 442 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 NEBLO76041 1014 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 ALPIP09923 528 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms