RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 VPS4AQ9UN37 437 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 FAM237BA0A1B0GVD1 139 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 DCXO43602 365 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 RNASEH1O60930 286 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ADSSP30520 456 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 RRM2P31350 389 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 FMO4P31512 558 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 HALP42357 657 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CRADDP78560 199 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CXCL17Q6UXB2 119 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 RIPOR1Q6ZS17 1223 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PNPT1Q8TCS8 783 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 FAM120BQ96EK7 910 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ACAT2Q9BWD1 397 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SLC6A15Q9H2J7 730 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 COQ4Q9Y3A0 265 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 TNPO3Q9Y5L0 923 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 MYH6P13533 1939 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 A0A1W2PQ72 361 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 MGAT4DA6NG13 374 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 CENPBD1B2RD01 187 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 BTN3A1O00481 513 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 SERPINA6P08185 405 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 F8A1P23610 371 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 GALK1P51570 392 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 RAB10P61026 200 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 DDX39BQ13838 428 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 FAM110CQ1W6H9 321 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 FAM98BQ52LJ0 330 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 TTC23Q5W5X9 447 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 ABRAXAS1Q6UWZ7 409 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 KRT78Q8N1N4 520 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 POU5F2Q8N7G0 328 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 FNDC5Q8NAU1 212 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 UBASH3BQ8TF42 649 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 MRPL57Q9BQC6 102 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 NXF3Q9H4D5 531 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 LRRC4CQ9HCJ2 640 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 RNF19AQ9NV58 838 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 CLIC5Q9NZA1 410 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 LGALS13Q9UHV8 139 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 ALS2Q96Q42 1657 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 MDM4O15151 490 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 EDF1O60869 148 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 ERCC2P18074 760 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 HTR7P34969 479 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 PABPC1LQ4VXU2 614 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 USP39Q53GS9 565 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 NIPAL1Q6NVV3 410 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 KCTD15Q96SI1 283 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 LGMNQ99538 433 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 SERHL2Q9H4I8 314 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 SSU72Q9NP77 194 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 SERHLQ9NQF3 203 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 AASDHPPTQ9NRN7 309 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 FAM105AQ9NUU6 356 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 DNAJB4Q9UDY4 337 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 PLCL2Q9UPR0 1127 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 CNTNAP1P78357 1384 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 A0A0G2JLL6 359 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 DPPA5A6NC42 116 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 F8W810 466 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 RGS14O43566 566 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 SYNCRIPO60506 623 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 SIN3BO75182 1162 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 CST3P01034 146 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 CES1P23141 567 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 DGKAP23743 735 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 PBLDP30039 288 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 CENPAP49450 140 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 POU5F1Q01860 360 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 BST1Q10588 318 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 CYP1B1Q16678 543 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 HECTD3Q5T447 861 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 RAP1GAP2Q684P5 730 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 DRICH1Q6PGQ1 229 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 PRRT2Q7Z6L0 340 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 MILR1Q7Z6M3 343 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 GPSM1Q86YR5 675 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 STAG3L4Q8TBR4 150 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 SLC44A1Q8WWI5 657 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 IRGQQ8WZA9 623 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 LPPQ93052 612 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 REPS1Q96D71 796 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 RAD18Q9NS91 495 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 CLDN5O00501 218 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 STK25O00506 426 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 PQBP1O60828 265 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 LRCH4O75427 683 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 STAU1O95793 577 aaKnown RBP7.25□□□□□ -1.25
CTNND1-218ENST00000528232 PIGRP01833 764 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 PTPN9P43378 593 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 MAPK8P45983 427 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 IL2P60568 153 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 LYPLAL1Q5VWZ2 237 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 LIPMQ5VYY2 423 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 ATG14Q6ZNE5 492 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 MOB2Q70IA6 237 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 C16orf59Q7L2K0 433 aa7.25□□□□□ -1.25
CTNND1-218ENST00000528232 C1orf127Q8N9H9 656 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms