RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 VCPIP1Q96JH7 1222 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 APOOQ9BUR5 198 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 SIRPGQ9P1W8 387 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 BPTFQ12830 3046 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 TK2O00142 265 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 KLK10O43240 276 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 BUB1BO60566 1050 aaPredicted RBP22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 RASGRP1O95267 797 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 PRKCGP05129 697 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 ALPIP09923 528 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 ATP1A3P13637 1013 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 HK3P52790 923 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 SPIDRQ14159 915 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 SRLQ86TD4 932 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 ATL2Q8NHH9 583 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 HIC2Q96JB3 615 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 CCDC3Q9BQI4 270 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 ATP13A3Q9H7F0 1226 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 PDFQ9HBH1 243 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 OR1A2Q9Y585 309 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 ENTPD2Q9Y5L3 495 aa22.56■■□□□ 1.2
TRAPPC4-208ENST00000527680 DFFAO00273 331 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 TEX33O43247 280 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 ATMINO43313 823 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 TCEA3O75764 348 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 PCCBP05166 539 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 CELA2BP08218 269 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 SERPINA4P29622 427 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 NCAPHQ15003 741 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 CA9Q16790 459 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 PPP6R3Q5H9R7 873 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 APTXQ7Z2E3 356 aaKnown RBP22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 GKN2Q86XP6 184 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 TSEN2Q8NCE0 465 aaKnown RBP22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 WDR48Q8TAF3 677 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 TUBGCP5Q96RT8 1024 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 CINPQ9BW66 212 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 EDEM3Q9BZQ6 932 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 NAT10Q9H0A0 1025 aaKnown RBP22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 SP110Q9HB58 689 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 ATP8A1Q9Y2Q0 1164 aa22.55■■□□□ 1.2
TRAPPC4-208ENST00000527680 LRRK1Q38SD2 2015 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 EIF3CLB5ME19 914 aaKnown RBP22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 PRPSAP2O60256 369 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 TNFP01375 233 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 UCNP55089 124 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 TMPRSS3P57727 454 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 SRP54P61011 504 aaKnown RBP22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 BCL2L1Q07817 233 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 NFATC4Q14934 902 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 ALG11Q2TAA5 492 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 ARHGAP40Q5TG30 622 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 LVRNQ6Q4G3 990 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 SLC46A1Q96NT5 459 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 EIF3CQ99613 913 aaKnown RBP22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 HSD3B7Q9H2F3 369 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 CPNE5Q9HCH3 593 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 ASCL3Q9NQ33 180 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 KLQ9UEF7 1012 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 MYO6Q9UM54 1294 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 GPR34Q9UPC5 381 aa22.54■■□□□ 1.2
TRAPPC4-208ENST00000527680 TSPAN11A1L157 253 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 FTLP02792 175 aaPredicted RBP22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 ERCC2P18074 760 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 CSNK1DP48730 415 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 POLR2LP62875 67 aaKnown RBP22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 ASIC2Q16515 512 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 FILIP1LQ4L180 1135 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 TAF1BQ53T94 588 aaPredicted RBP22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 CCDC183Q5T5S1 534 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 PLEKHA7Q6IQ23 1121 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 RFX8Q6ZV50 586 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 ARL14Q8N4G2 192 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 ARL10Q8N8L6 244 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 WDR36Q8NI36 951 aaKnown RBP22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 PCDH19Q8TAB3 1148 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 WDR92Q96MX6 357 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 SNRNP25Q9BV90 132 aaKnown RBP22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 DPH1Q9BZG8 443 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 WDR70Q9NW82 654 aa22.53■■□□□ 1.2
TRAPPC4-208ENST00000527680 KIF26BQ2KJY2 2108 aa22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 LRRC53A6NM62 1247 aa22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 CASC3O15234 703 aaKnown RBP22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 MMP12P39900 470 aa22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 RGRP47804 291 aa22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 SCNN1BP51168 640 aa22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 TYRO3Q06418 890 aa22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 ZSWIM9Q86XI8 627 aa22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 SDR16C5Q8N3Y7 309 aa22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 LSM14AQ8ND56 463 aaKnown RBP22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 CCDC97Q96F63 343 aaPredicted RBP22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 KCTD15Q96SI1 283 aaPredicted RBP22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 HAUS4Q9H6D7 363 aa22.52■■□□□ 1.2
TRAPPC4-208ENST00000527680 TMEM191CA6NGB0 347 aa22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 A8MX80 341 aa22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 CACNB4O00305 520 aaPredicted RBP22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 TNFSF15O95150 251 aa22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 MIPP30301 263 aa22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 NSUN2Q08J23 767 aaKnown RBP eCLIP22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 MTM1Q13496 603 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms