RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 RAB11FIP2Q7L804 512 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 STRADAQ7RTN6 431 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 VASH2Q86V25 355 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 ARL14Q8N4G2 192 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 RTL3Q8N8U3 475 aaKnown RBP14.4□□□□□ -0.1
CPSF1-201ENST00000526271 MLKLQ8NB16 471 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 PTCD2Q8WV60 388 aaKnown RBP14.4□□□□□ -0.1
CPSF1-201ENST00000526271 EXTL1Q92935 676 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 NTAN1Q96AB6 310 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 TBC1D31Q96DN5 1066 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 GDAP1L1Q96MZ0 367 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 APOOQ9BUR5 198 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 STK33Q9BYT3 514 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 CPEB1Q9BZB8 566 aaKnown RBP14.4□□□□□ -0.1
CPSF1-201ENST00000526271 SLC13A1Q9BZW2 595 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 LRRN3Q9H3W5 708 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 CLMPQ9H6B4 373 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 SYNDIG1Q9H7V2 258 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 EPB41L5Q9HCM4 733 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 PCDH12Q9NPG4 1184 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 EVA1BQ9NVM1 165 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 ST14Q9Y5Y6 855 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 ZFC3H1O60293 1989 aaKnown RBP14.4□□□□□ -0.1
CPSF1-201ENST00000526271 CAPN8A6NHC0 703 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 C9orf172C9J069 976 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 J3KR12 359 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 RIOK3O14730 519 aaKnown RBP14.39□□□□□ -0.11
CPSF1-201ENST00000526271 TERTO14746 1132 aaKnown RBP14.39□□□□□ -0.11
CPSF1-201ENST00000526271 CCP110O43303 1012 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 BUB1O43683 1085 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 GFPT2O94808 682 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 FUCA1P04066 466 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-201ENST00000526271 SDC4P31431 198 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 MMP12P39900 470 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 SRP54P61011 504 aaKnown RBP14.39□□□□□ -0.11
CPSF1-201ENST00000526271 CDR2Q01850 454 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 SERINC3Q13530 473 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 AGERQ15109 404 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 SKOR2Q2VWA4 1001 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-201ENST00000526271 OGFOD3Q6PK18 319 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 ENPP7Q6UWV6 458 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 ZFAND4Q86XD8 727 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 SLITRK4Q8IW52 837 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 FBXO39Q8N4B4 442 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 CXorf40AQ8TE69 158 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 RBM15Q96T37 977 aaKnown RBP eCLIP14.39□□□□□ -0.115e-7■□□□□ 9.7
CPSF1-201ENST00000526271 LGR4Q9BXB1 951 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 PDCL3Q9H2J4 239 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 STARD5Q9NSY2 213 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 TAB2Q9NYJ8 693 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 GPR34Q9UPC5 381 aa14.39□□□□□ -0.11
CPSF1-201ENST00000526271 PRAMEF33A0A0G2JMD5 474 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 WASH4PA8MWX3 477 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 PRAMEF10O60809 474 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 ETFBP38117 255 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 RPIAP49247 311 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 LIG3P49916 1009 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 PEX5P50542 639 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 INHBCP55103 352 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 GSCP56915 257 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-201ENST00000526271 CYP4F2P78329 520 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 NFATC3Q12968 1075 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 LRRC14Q15048 493 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 UGP2Q16851 508 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 INO80DQ53TQ3 878 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-201ENST00000526271 PPP1R15BQ5SWA1 713 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 LVRNQ6Q4G3 990 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 RD3Q7Z3Z2 195 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 DTX1Q86Y01 620 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 CAMK1DQ8IU85 385 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 TP53INP2Q8IXH6 220 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 FSTL5Q8N475 847 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-201ENST00000526271 WDR48Q8TAF3 677 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 ARHGEF26Q96DR7 871 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 NUP62CLQ9H1M0 184 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 RETREG1Q9H6L5 497 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 LRRC19Q9H756 370 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 PISDQ9UG56 409 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 LOXL2Q9Y4K0 774 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 RNF215Q9Y6U7 377 aa14.38□□□□□ -0.11
CPSF1-201ENST00000526271 B4GAT1O43505 415 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 IGSF6O95976 241 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 FAM87AP0C7U9 286 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 GEMIN4P57678 1058 aaKnown RBP14.37□□□□□ -0.11
CPSF1-201ENST00000526271 RHOAP61586 193 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 RPL7AP62424 266 aaKnown RBP14.37□□□□□ -0.11
CPSF1-201ENST00000526271 B4GALNT1Q00973 533 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 HLTFQ14527 1009 aaKnown RBP eCLIP14.37□□□□□ -0.11
CPSF1-201ENST00000526271 C16orf72Q14CZ0 275 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 ELOCQ15369 112 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 CA9Q16790 459 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 CERCAMQ5T4B2 595 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 ESRP1Q6NXG1 681 aaKnown RBP14.37□□□□□ -0.11
CPSF1-201ENST00000526271 ZNF574Q6ZN55 896 aaPredicted RBP14.37□□□□□ -0.11
CPSF1-201ENST00000526271 RBM43Q6ZSC3 357 aaKnown RBP14.37□□□□□ -0.11
CPSF1-201ENST00000526271 MON1BQ7L1V2 547 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 SPRED1Q7Z699 444 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 NRROSQ86YC3 692 aa14.37□□□□□ -0.11
CPSF1-201ENST00000526271 UMODL1-AS1Q8N2C9 162 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms