RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TBC1D30Q9Y2I9 924 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 GDAQ9Y2T3 454 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 TRPV2Q9Y5S1 764 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 CDY1Q9Y6F8 540 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 ARHGEF17Q96PE2 2063 aaPredicted RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 SMTNL1A8MU46 457 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 K7ENM7 598 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 QSOX1O00391 747 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 FOXN3O00409 490 aaPredicted RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 ACKR2O00590 384 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 CSDE1O75534 798 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 RPS6KA5O75582 802 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 CAVIN2O95810 425 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 ERBB2P04626 1255 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 CLTBP09497 229 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 IQCF3P0C7M6 154 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 DARSP14868 501 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 DRD4P21917 467 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 PCSK6P29122 969 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 PRKAR1BP31321 381 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 MAN1A1P33908 653 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 MATR3P43243 847 aaKnown RBP eCLIP4.77□□□□□ -1.65
USP48-211ENST00000526044 CASP5P51878 434 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 SNRPFP62306 86 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 MGAT3Q09327 533 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 PRPF4BQ13523 1007 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 RAPGEF1Q13905 1077 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 ARHGEF7Q14155 803 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 SLC29A2Q14542 456 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 MAPRE1Q15691 268 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 STX1AQ16623 288 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 KNOP1Q1ED39 458 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 LRRC26Q2I0M4 334 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 TRIM71Q2Q1W2 868 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 PTCHD3Q3KNS1 767 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 TMEM95Q3KNT9 176 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 COBLL1Q53SF7 1204 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 AARS2Q5JTZ9 985 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 CERCAMQ5T4B2 595 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 ANKRD40Q6AI12 368 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 CENPPQ6IPU0 288 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 KLHL10Q6JEL2 608 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 PARS2Q7L3T8 475 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 CATSPER4Q7RTX7 472 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 UBE2Q1Q7Z7E8 422 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 NELFCDQ8IXH7 590 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 YAF2Q8IY57 180 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 ADSSL1Q8N142 457 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 SDR16C5Q8N3Y7 309 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 USP38Q8NB14 1042 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 KIAA0895Q8NCT3 520 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 TMEM161BQ8NDZ6 487 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 MYRIPQ8NFW9 859 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 RP9Q8TA86 221 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 SCFD1Q8WVM8 642 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 XAGE5Q8WWM1 108 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 IPCEF1Q8WWN9 437 aaPredicted RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 SARAFQ96BY9 339 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 R3HDM4Q96D70 268 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 HVCN1Q96D96 273 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 CTAGE1Q96RT6 745 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 FIZ1Q96SL8 496 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 TCHPQ9BT92 498 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 HTATIP2Q9BUP3 242 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 KIFC3Q9BVG8 833 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 SARGQ9BW04 601 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 APOL5Q9BWW9 433 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 STRA6Q9BX79 667 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 TRIM5Q9C035 493 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 UNKQ9C0B0 810 aaKnown RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 CHST8Q9H2A9 424 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 HIPK3Q9H422 1215 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 FZD8Q9H461 694 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 TSPY26PQ9H489 355 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 PRMT7Q9NVM4 692 aaPredicted RBP4.77□□□□□ -1.65
USP48-211ENST00000526044 DLL3Q9NYJ7 618 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 ITGB1BP2Q9UKP3 347 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 LZTS1Q9Y250 596 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 SNX13Q9Y5W8 968 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 WNT6Q9Y6F9 365 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 SQORQ9Y6N5 450 aa4.77□□□□□ -1.65
USP48-211ENST00000526044 UBE4BO95155 1302 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 BICDL2A1A5D9 508 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 LRRC3CA6NJW4 275 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 ANKRD63C9JTQ0 380 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 H7C4K7 107 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 PDXKO00764 312 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 PSMA7O14818 248 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 CLIC2O15247 247 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 CLDN3O15551 220 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 RGS10O43665 173 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 CALUO43852 315 aaPredicted RBP4.76□□□□□ -1.65
USP48-211ENST00000526044 ERLIN2O94905 339 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 INMTO95050 263 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 RASAL1O95294 804 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 FGFR1OPO95684 399 aaKnown RBP4.76□□□□□ -1.65
USP48-211ENST00000526044 C1RP00736 705 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 TIMP1P01033 207 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 PRKCBP05771 671 aa4.76□□□□□ -1.65
USP48-211ENST00000526044 DLDP09622 509 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms