RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 ITM2BQ9Y287 266 aa13.05□□□□□ -0.32
CTSB-209ENST00000525315 PPIL1Q9Y3C6 166 aa13.05□□□□□ -0.32
CTSB-209ENST00000525315 DCDC2BA2VCK2 349 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 MIF4GDA9UHW6 222 aaKnown RBP13.04□□□□□ -0.32
CTSB-209ENST00000525315 PPP1R12AO14974 1030 aaPredicted RBP13.04□□□□□ -0.32
CTSB-209ENST00000525315 KRT86O43790 486 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 FZD6O60353 706 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 DFNA5O60443 496 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 MAGEC1O60732 1142 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 MMP20O60882 483 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 CER1O95813 267 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 JCHAINP01591 159 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 HLA-DQB2P05538 268 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 PYGMP11217 842 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 CD59P13987 128 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 PRLRP16471 622 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 AKT2P31751 481 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 MMP12P39900 470 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 C21orf59P57076 290 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 AP1B1Q10567 949 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 TRAF2Q12933 501 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 AGERQ15109 404 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 LLGL1Q15334 1064 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 UAP1L1Q3KQV9 507 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 LRRC73Q5JTD7 316 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 ERAP2Q6P179 960 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 LAYNQ6UX15 382 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 BBS12Q6ZW61 710 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 PEX26Q7Z412 305 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 ABI3BPQ7Z7G0 1075 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 PIP4P1Q86T03 277 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 CCDC50Q8IVM0 306 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 CBARPQ8N350 705 aaPredicted RBP13.04□□□□□ -0.32
CTSB-209ENST00000525315 ARRDC2Q8TBH0 407 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 CXorf40AQ8TE69 158 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 ALG3Q92685 438 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 P3H4Q92791 437 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 CENPTQ96BT3 561 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 KLHDC7BQ96G42 594 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 HES6Q96HZ4 224 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 ERVMER34-1Q9H9K5 563 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 IL21RQ9HBE5 538 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 HAUS2Q9NVX0 235 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 PHTF1Q9UMS5 762 aa13.04□□□□□ -0.32
CTSB-209ENST00000525315 ARID1BQ8NFD5 2236 aaPredicted RBP13.03□□□□□ -0.32
CTSB-209ENST00000525315 KCNK1O00180 336 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 KCNK3O14649 394 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 RAD51BO15315 384 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 DDX3YO15523 660 aaKnown RBP13.03□□□□□ -0.32
CTSB-209ENST00000525315 TM7SF2O76062 418 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 PGLSO95336 258 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 PECAM1P16284 738 aaPredicted RBP13.03□□□□□ -0.32
CTSB-209ENST00000525315 NXPH1P58417 271 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 DSC2Q02487 901 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 ITKQ08881 620 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 NIPAL4Q0D2K0 466 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 PRKD1Q15139 912 aaPredicted RBP13.03□□□□□ -0.32
CTSB-209ENST00000525315 TEX44Q53QW1 395 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 CFAP58Q5T655 872 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 GCNT7Q6ZNI0 430 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 SPATS2Q86XZ4 545 aaKnown RBP13.03□□□□□ -0.32
CTSB-209ENST00000525315 DCP2Q8IU60 420 aaKnown RBP13.03□□□□□ -0.32
CTSB-209ENST00000525315 DENND6BQ8NEG7 585 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 PIH1D2Q8WWB5 315 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 HERPUD2Q9BSE4 406 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 HEMGNQ9BXL5 484 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 OSBPL8Q9BZF1 889 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 FZD3Q9NPG1 666 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 GUCA1BQ9UMX6 200 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 CA5BQ9Y2D0 317 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 PCDHB9Q9Y5E1 797 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 PCDHGB2Q9Y5G2 931 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 RAI2Q9Y5P3 530 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 CAPN6Q9Y6Q1 641 aa13.03□□□□□ -0.32
CTSB-209ENST00000525315 A0A1B0GTQ1 180 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 POM121BA6NF01 834 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 HACD1B0YJ81 288 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 H0Y8X5 98 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 APOC4-APOC2K7ER74 178 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 FTCDO95954 541 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 APOC2P02655 101 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 PRKCGP05129 697 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 MMP2P08253 660 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 PDHA1P08559 390 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 CCDC175P0C221 793 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 THEGLP0DJG4 465 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 CSRP1P21291 193 aaKnown RBP13.02□□□□□ -0.33
CTSB-209ENST00000525315 CETN2P41208 172 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 RXRGP48443 463 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 LIG3P49916 1009 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 FAM193AP78312 1265 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 RALGDSQ12967 914 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 ZBTB17Q13105 803 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 XRCC4Q13426 336 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 ARMC12Q5T9G4 340 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 LIPIQ6XZB0 460 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 DPPA4Q7L190 304 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 DGLUCYQ7Z3D6 616 aa13.02□□□□□ -0.33
CTSB-209ENST00000525315 UBL4BQ8N7F7 174 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms