RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 C1QTNF3-AMACRE9PGA6 284 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 SCAMP1O15126 338 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 GPR39O43194 453 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 HRO43593 1189 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 ALDH1A2O94788 518 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 FSBPO95073 299 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 PAK4O96013 591 aaPredicted RBP13.18□□□□□ -0.3
SWAP70-203ENST00000524817 ADRB3P13945 408 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 CDK18Q07002 472 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 NSUN2Q08J23 767 aaKnown RBP eCLIP13.18□□□□□ -0.3
SWAP70-203ENST00000524817 POU6F1Q14863 301 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 CYP1B1Q16678 543 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 TEX35Q5T0J7 233 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 AGBL4Q5VU57 503 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 CES3Q6UWW8 571 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 DNAAF3Q8N9W5 541 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 DRG1Q9Y295 367 aaKnown RBP13.18□□□□□ -0.3
SWAP70-203ENST00000524817 OPHN1O60890 802 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 GCATO75600 419 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 CLDN7O95471 211 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 RPL6Q02878 288 aaKnown RBP13.18□□□□□ -0.3
SWAP70-203ENST00000524817 SIRPB2Q5JXA9 342 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 PIP5KL1Q5T9C9 394 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 ERN2Q76MJ5 926 aaKnown RBP13.18□□□□□ -0.3
SWAP70-203ENST00000524817 DSG4Q86SJ6 1040 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 KCNV2Q8TDN2 545 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 SMOC1Q9H4F8 434 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 B4GALT6Q9UBX8 382 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 SPO11Q9Y5K1 396 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 EFCAB8A8MWE9 144 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 TMEM63AO94886 807 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 HNF1BP35680 557 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 WHAMMP3Q1A5X7 153 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 CCDC26Q8TAB7 109 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 CASKIN2Q8WXE0 1202 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 FUBP1Q96AE4 644 aaKnown RBP13.18□□□□□ -0.3
SWAP70-203ENST00000524817 FCRL5Q96RD9 977 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 PABPC3Q9H361 631 aaKnown RBP13.18□□□□□ -0.3
SWAP70-203ENST00000524817 SUDS3Q9H7L9 328 aaPredicted RBP13.18□□□□□ -0.3
SWAP70-203ENST00000524817 ARFGAP3Q9NP61 516 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 IL1RAPL1Q9NZN1 696 aa13.18□□□□□ -0.3
SWAP70-203ENST00000524817 PI4KAP42356 2102 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 MTSS1O43312 755 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 PGLSO95336 258 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 GAS8O95995 478 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 LHCGRP22888 699 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 SEPT6Q14141 434 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 PRAMEF14Q5SWL7 426 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 C8orf74Q6P047 294 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 KDELC1Q6UW63 502 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 BMP8AQ7Z5Y6 402 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 PIH1D2Q8WWB5 315 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 BTBD1Q9H0C5 482 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 EBF2Q9HAK2 575 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 FSCN3Q9NQT6 498 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 MBD1Q9UIS9 605 aaPredicted RBP13.17□□□□□ -0.3
SWAP70-203ENST00000524817 TRHDEQ9UKU6 1024 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 IGLON5A6NGN9 336 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 H0Y8X5 98 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 SPINT1O43278 529 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 CPP00450 1065 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 SP9P0CG40 484 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 ADPRHP54922 357 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 AP1S1P61966 158 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 GUCY2DQ02846 1103 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 PARP6Q2NL67 630 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 TTC31Q49AM3 519 aaPredicted RBP13.17□□□□□ -0.3
SWAP70-203ENST00000524817 ITPRIPL1Q6GPH6 555 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 CAPN12Q6ZSI9 719 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 PELI3Q8N2H9 469 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 C12orf50Q8NA57 414 aaPredicted RBP13.17□□□□□ -0.3
SWAP70-203ENST00000524817 KDM1BQ8NB78 822 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 MNS1Q8NEH6 495 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 IFT81Q8WYA0 676 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 ZNF778Q96MU6 729 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 HOMER3Q9NSC5 361 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 ARL5AQ9Y689 179 aa13.17□□□□□ -0.3
SWAP70-203ENST00000524817 IGHV1OR15-9A0A0B4J2B8 117 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 ANKRD66B4E2M5 251 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 WNT9AO14904 365 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 NPC1O15118 1278 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 PIAS1O75925 651 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 C5AR1P21730 350 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 RPL21P46778 160 aaKnown RBP13.16□□□□□ -0.3
SWAP70-203ENST00000524817 QPCTQ16769 361 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 FAM46CQ5VWP2 391 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 ALS2CLQ60I27 953 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 DRICH1Q6PGQ1 229 aaPredicted RBP13.16□□□□□ -0.3
SWAP70-203ENST00000524817 RGL4Q8IZJ4 473 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 CPT1BQ92523 772 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 EID2BQ96D98 161 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 VAT1Q99536 393 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 ITM2CQ9NQX7 267 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 PAK5Q9P286 719 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 NEU2Q9Y3R4 380 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 C1orf232A0A0U1RR37 186 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 FNTAP49354 379 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 NEK3P51956 506 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 CKAP4Q07065 602 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms