RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MAP3K20Q9NYL2 800 aaKnown RBP3.25□□□□□ -1.89
CSDE1-208ENST00000524652 UBIAD1Q9Y5Z9 338 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 MICAL3Q7RTP6 2002 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 ZNF292O60281 2723 aa3.25□□□□□ -1.89
CSDE1-208ENST00000524652 PDCD11Q14690 1871 aaKnown RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CEP290O15078 2479 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CYP3A7-CYP3A51PA0A087WV96 503 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 SLC22A23A1A5C7 686 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 TPP1O14773 563 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 MSH4O15457 936 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CTIFO43310 598 aaKnown RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CCNT1O60563 726 aaKnown RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 SYF2O95926 243 aaKnown RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CYP3A4P08684 503 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 UBA1P22314 1058 aaKnown RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CYP3A7P24462 503 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 TBXAS1P24557 533 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 PEX2P28328 305 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 DUSP1P28562 367 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 GNA11P29992 359 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ICAM3P32942 547 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CIITAP33076 1130 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CDKN2AP42771 156 aaKnown RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 MRPL12P52815 198 aaKnown RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ARHGAP1Q07960 439 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ITGB3BPQ13352 177 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ACVR2BQ13705 512 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 KCNJ12Q14500 433 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 NONOQ15233 471 aaKnown RBP eCLIP3.24□□□□□ -1.892e-6■■□□□ 12.7
CSDE1-208ENST00000524652 NFE2Q16621 373 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 LETM2Q2VYF4 491 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 AASDHQ4L235 1098 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ARHGAP29Q52LW3 1261 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CEP55Q53EZ4 464 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 UBAP2Q5T6F2 1119 aaKnown RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ARHGEF16Q5VV41 709 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 GALNT17Q6IS24 598 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 FBXO46Q6PJ61 603 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 SEPT14Q6ZU15 432 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CHST15Q7LFX5 561 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CCAR1Q8IX12 1150 aaKnown RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 SAMD3Q8N6K7 520 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ETNPPLQ8TBG4 499 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 RAET1EQ8TD07 263 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 LRRC15Q8TF66 581 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CCDC12Q8WUD4 166 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 SLC25A28Q96A46 364 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CAMK1GQ96NX5 476 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 USP28Q96RU2 1077 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 WDR24Q96S15 920 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 MXRA8Q9BRK3 442 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 SCNM1Q9BWG6 230 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 MAF1Q9H063 256 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 BTBD1Q9H0C5 482 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 SLC25A32Q9H2D1 315 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ABHD16BQ9H3Z7 469 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 MRPL44Q9H9J2 332 aaKnown RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 SAP30LQ9HAJ7 183 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 MLXIPQ9HAP2 919 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 MLXIPLQ9NP71 852 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 KCNMB3Q9NPA1 279 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 RXFP3Q9NSD7 469 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ABHD10Q9NUJ1 306 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ZHX1Q9UKY1 873 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-208ENST00000524652 PCDHA12Q9UN75 941 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 CLIC4Q9Y696 253 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 ATG2AQ2TAZ0 1938 aa3.24□□□□□ -1.89
CSDE1-208ENST00000524652 KIAA1671Q9BY89 1806 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 SYNRGQ9UMZ2 1314 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 LOC102724159A0A0B4J2E5 919 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 CCDC194A0A1B0GVG4 234 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 GSTTP1A0A1W2PQM5 241 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 EME2A4GXA9 379 aaPredicted RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 ASB14A6NK59 587 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 C16orf96A6NNT2 1141 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 PP2D1A8MPX8 630 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 LACTBL1A8MY62 500 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 TTC34A8MYJ7 566 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 ZNF814B7Z6K7 855 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 H3BQV1 296 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 DDX39AO00148 427 aaKnown RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 CITO14578 2027 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 SEPT4O43236 478 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 EIF3JO75822 258 aaKnown RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 PSMD10O75832 226 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 EPN2O95208 641 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 GGPS1O95749 300 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 CCNE2O96020 404 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 PGK1P00558 417 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 ANXA2P07355 339 aaKnown RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 CCL5P13501 91 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 XBP1P17861 261 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 TFEBP19484 476 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 MATN1P21941 496 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 HOXD10P28358 340 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 CCND2P30279 289 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 ANP32AP39687 249 aaKnown RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 PRMT2P55345 433 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 BEX3Q00994 111 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 CEBPZQ03701 1054 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms