RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 GOLGA8CPA6NN73 597 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 RIOK3O14730 519 aaKnown RBP12.91□□□□□ -0.34
VEGFA-224ENST00000523873 LATO43561 262 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 AP1G1O43747 822 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 MT-CYBP00156 380 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-224ENST00000523873 ALPIP09923 528 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 IRX4P78413 519 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 SNX1Q13596 522 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 SIX1Q15475 284 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-224ENST00000523873 CSRP2Q16527 193 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 PCSK7Q16549 785 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 KCTD19Q17RG1 926 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-224ENST00000523873 TMEM259Q4ZIN3 620 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 RALGPS1Q5JS13 557 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 ARMC12Q5T9G4 340 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 PID1Q7Z2X4 250 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 KDELC2Q7Z4H8 507 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 PRPF39Q86UA1 669 aaKnown RBP12.91□□□□□ -0.34
VEGFA-224ENST00000523873 TTC13Q8NBP0 860 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 C1orf216Q8TAB5 229 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 SLC35B2Q8TB61 432 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 CCDC110Q8TBZ0 833 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 HCAR2Q8TDS4 363 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 RAB7BQ96AH8 199 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 MS4A14Q96JA4 679 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 SERAC1Q96JX3 654 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 TDRD1Q9BXT4 1180 aaKnown RBP12.91□□□□□ -0.34
VEGFA-224ENST00000523873 TM9SF3Q9HD45 589 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 B4GALT6Q9UBX8 382 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 JRKLQ9Y4A0 524 aa12.91□□□□□ -0.34
VEGFA-224ENST00000523873 KNL1Q8NG31 2342 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 LRP4O75096 1905 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 A0A1B0GTW7 788 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 RAD51BO15315 384 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 BCAT2O15382 392 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-224ENST00000523873 TSPAN6O43657 245 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 FZD6O60353 706 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 PRLP01236 227 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 FGGP02679 453 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 WNT1P04628 370 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 SERPINF2P08697 491 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 ZNF806P0C7X5 589 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 MMP12P39900 470 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 CSNK1EP49674 416 aaKnown RBP12.9□□□□□ -0.34
VEGFA-224ENST00000523873 GDF10P55107 478 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 GNG11P61952 73 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 GALNT3Q14435 633 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 DUOXA1Q1HG43 343 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 TMEM52BQ4KMG9 183 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 KIAA1161Q6NSJ0 714 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 ERAP2Q6P179 960 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 NEK5Q6P3R8 708 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 PRR23CQ6ZRP0 262 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 PRUNE1Q86TP1 453 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 TAB3Q8N5C8 712 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-224ENST00000523873 LPCAT1Q8NF37 534 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 OR2I1PQ8NGU4 316 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 CXorf40AQ8TE69 158 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 COG1Q8WTW3 980 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 PIH1D2Q8WWB5 315 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 IMP4Q96G21 291 aaKnown RBP12.9□□□□□ -0.34
VEGFA-224ENST00000523873 OXNAD1Q96HP4 312 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-224ENST00000523873 FEM1CQ96JP0 617 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 WDR24Q96S15 920 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 GORASP1Q9BQQ3 440 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 SLC25A51Q9H1U9 297 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 USP29Q9HBJ7 922 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 PCDH9Q9HC56 1237 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 AASDHPPTQ9NRN7 309 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 HAUS2Q9NVX0 235 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 RSPH14Q9UHP6 348 aa12.9□□□□□ -0.34
VEGFA-224ENST00000523873 EP300Q09472 2414 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-224ENST00000523873 ASCC3Q8N3C0 2202 aaKnown RBP12.89□□□□□ -0.35
VEGFA-224ENST00000523873 A0A1B0GVT2 93 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 NPIPB15A6NHN6 443 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-224ENST00000523873 H0Y8X5 98 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 KHNYNO15037 678 aaKnown RBP12.89□□□□□ -0.35
VEGFA-224ENST00000523873 MTSS1O43312 755 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 LIASO43766 372 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 GDF9O60383 454 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 PMPCBO75439 489 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 PAK4O96013 591 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-224ENST00000523873 C6P13671 934 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 GNSP15586 552 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 CES1P23141 567 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 CLDN2P57739 230 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 RPS21P63220 83 aaKnown RBP12.89□□□□□ -0.35
VEGFA-224ENST00000523873 BNC1Q01954 994 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 ELP6Q0PNE2 266 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 LONRF2Q1L5Z9 754 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 SETMARQ53H47 684 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-224ENST00000523873 ANKRD20A2Q5SQ80 823 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 ANKRD20A1Q5TYW2 823 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 ANKRD20A3Q5VUR7 823 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 DENND2CQ68D51 928 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 NAPEPLDQ6IQ20 393 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 SLC23A3Q6PIS1 610 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 DPPA4Q7L190 304 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 TSPAN33Q86UF1 283 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms