RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CAPN12Q6ZSI9 719 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 ZSWIM9Q86XI8 627 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 CD93Q9NPY3 652 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 IL36AQ9UHA7 158 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 CUL9Q8IWT3 2517 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 SMIM23A6NLE4 172 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 SRRM3A6NNA2 597 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 BUD23O43709 281 aaKnown RBP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 FAM107AO95990 144 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 ALPIP09923 528 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 GLULP15104 373 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 FDFT1P37268 417 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 PSMD8P48556 350 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 ZXDAP98168 799 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 NSUN2Q08J23 767 aaKnown RBP eCLIP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 SEMA5AQ13591 1074 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 KCNJ11Q14654 390 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 FNBP1LQ5T0N5 605 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 RNF187Q5TA31 235 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 SYDE1Q6ZW31 735 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 YTHDF3Q7Z739 585 aaKnown RBP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 PPIL6Q8IXY8 311 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 NAT8LQ8N9F0 302 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 PRCCQ92733 491 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 VOPP1Q96AW1 172 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 PPANQ9NQ55 473 aaKnown RBP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 SHOC2Q9UQ13 582 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 FNDC3AQ9Y2H6 1198 aaKnown RBP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 AAR2Q9Y312 384 aaKnown RBP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-219ENST00000522387 WASF2Q9Y6W5 498 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 CACNA1IQ9P0X4 2223 aa12.47□□□□□ -0.41
PABPC1-219ENST00000522387 EDDM13A0A1B0GTR0 161 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 A0A1W2PQF6 199 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 ANXA9O76027 345 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 POP4O95707 220 aaKnown RBP12.46□□□□□ -0.41
PABPC1-219ENST00000522387 EPHB1P54762 984 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 PRKCQQ04759 706 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 CDK18Q07002 472 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 ZNF844Q08AG5 666 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 FZD5Q13467 585 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 POU6F1Q14863 301 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 MSS51Q4VC12 460 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 CERCAMQ5T4B2 595 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 CASC4Q6P4E1 433 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 PPP1R21Q6ZMI0 780 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 MPP5Q8N3R9 675 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 CCHCR1Q8TD31 782 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 FATE1Q969F0 183 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 SHDQ96IW2 340 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 HEPHQ9BQS7 1158 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 TDRD1Q9BXT4 1180 aaKnown RBP12.46□□□□□ -0.41
PABPC1-219ENST00000522387 CEP44Q9C0F1 390 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 SEMA4AQ9H3S1 761 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 ATP13A3Q9H7F0 1226 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 AP2A1O95782 977 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 STARD6P59095 220 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 FASTKD3Q14CZ7 662 aaKnown RBP12.46□□□□□ -0.41
PABPC1-219ENST00000522387 KCTD11Q693B1 232 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 HIBCHQ6NVY1 386 aaPredicted RBP12.46□□□□□ -0.41
PABPC1-219ENST00000522387 FAM124AQ86V42 546 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 ANKMY2Q8IV38 441 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 PIP4K2CQ8TBX8 421 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 BLOC1S5Q8TDH9 187 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 HMGB4Q8WW32 186 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 ISG20Q96AZ6 181 aaKnown RBP12.46□□□□□ -0.41
PABPC1-219ENST00000522387 SERPINB12Q96P63 405 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 FAM129BQ96TA1 746 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 TBL1YQ9BQ87 522 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 SIT1Q9Y3P8 196 aa12.46□□□□□ -0.41
PABPC1-219ENST00000522387 PRR23AA6NEV1 266 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 FAM47DPA6NHR8 397 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 PRLP01236 227 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 SERPINA4P29622 427 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 MNAT1P51948 309 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 GEMP55040 296 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 RAD51Q06609 339 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 IFT88Q13099 833 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 ELAVL3Q14576 367 aaKnown RBP12.45□□□□□ -0.42
PABPC1-219ENST00000522387 BBS9Q3SYG4 887 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 SIRPB2Q5JXA9 342 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 SWT1Q5T5J6 900 aaKnown RBP12.45□□□□□ -0.42
PABPC1-219ENST00000522387 ANO7Q6IWH7 933 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 KDELC1Q6UW63 502 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 CES3Q6UWW8 571 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 GDPD4Q6W3E5 623 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 TTC7BQ86TV6 843 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 METTL3Q86U44 580 aaKnown RBP12.45□□□□□ -0.42
PABPC1-219ENST00000522387 CAND1Q86VP6 1230 aaKnown RBP12.45□□□□□ -0.42
PABPC1-219ENST00000522387 TMPRSS6Q8IU80 811 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 PGBD3Q8N328 593 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 OR8D1Q8WZ84 308 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 HHIPQ96QV1 700 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 EPB41L4BQ9H329 900 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 SUV39H2Q9H5I1 410 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 HAUS2Q9NVX0 235 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 IL1RAPL1Q9NZN1 696 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 ITM2BQ9Y287 266 aa12.45□□□□□ -0.42
PABPC1-219ENST00000522387 MAD1L1Q9Y6D9 718 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms