RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 BNIP3Q12983 259 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 FAM174AQ8TBP5 190 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 MAML1Q92585 1016 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 HDAC11Q96DB2 347 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 LGMNQ99538 433 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 KLF6Q99612 283 aaPredicted RBP18.8■□□□□ 0.6
FAM49B-208ENST00000518344 SEMA3CQ99985 751 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 C1QTNF7Q9BXJ2 289 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 POLR1EQ9GZS1 481 aaKnown RBP18.8■□□□□ 0.6
FAM49B-208ENST00000518344 LACRTQ9GZZ8 138 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.8■□□□□ 0.6
FAM49B-208ENST00000518344 YKT6O15498 198 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 CBFA2T3O75081 653 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 ZRANB2O95218 330 aaKnown RBP eCLIP18.79■□□□□ 0.6
FAM49B-208ENST00000518344 JCHAINP01591 159 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 C6P13671 934 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 EPHA8P29322 1005 aaPredicted RBP18.79■□□□□ 0.6
FAM49B-208ENST00000518344 MMP12P39900 470 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 CDKN2BP42772 138 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 GRK6P43250 576 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 RABIFP47224 123 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 AP1B1Q10567 949 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 RALGPS1Q5JS13 557 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 KAZNQ674X7 775 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 KYAT3Q6YP21 454 aaKnown RBP18.79■□□□□ 0.6
FAM49B-208ENST00000518344 SPOCD1Q6ZMY3 1216 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 CCDC50Q8IVM0 306 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 SLC22A18ASQ8N1D0 253 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 DENND6BQ8NEG7 585 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 SAP25Q8TEE9 199 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 FATE1Q969F0 183 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 CENPTQ96BT3 561 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 DESI2Q9BSY9 194 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 MBNL1Q9NR56 388 aaKnown RBP18.79■□□□□ 0.6
FAM49B-208ENST00000518344 HAUS2Q9NVX0 235 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 RAI2Q9Y5P3 530 aa18.79■□□□□ 0.6
FAM49B-208ENST00000518344 A0A1W2PQ67 120 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 KCNK1O00180 336 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 HTRA2O43464 458 aaPredicted RBP18.78■□□□□ 0.6
FAM49B-208ENST00000518344 SDC3O75056 442 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 SOCS5O75159 536 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 CPP00450 1065 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 RXRGP48443 463 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 MARCKSL1P49006 195 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 DSC2Q02487 901 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 PPIDQ08752 370 aaKnown RBP18.78■□□□□ 0.6
FAM49B-208ENST00000518344 TRAF2Q12933 501 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 FOXC1Q12948 553 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 TFDP2Q14188 446 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 PDK1Q15118 436 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 INAVAQ3KP66 663 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 KDM7AQ6ZMT4 941 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 B4GALNT4Q76KP1 1039 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 DCP2Q8IU60 420 aaKnown RBP18.78■□□□□ 0.6
FAM49B-208ENST00000518344 KATNAL2Q8IYT4 538 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 RCOR2Q8IZ40 523 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 KRT35Q92764 455 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 CALR3Q96L12 384 aaKnown RBP18.78■□□□□ 0.6
FAM49B-208ENST00000518344 CDC6Q99741 560 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 PHTF1Q9UMS5 762 aa18.78■□□□□ 0.6
FAM49B-208ENST00000518344 CACNA1EQ15878 2313 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 GOLGA8CPA6NN73 597 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 BTNL10A8MVZ5 291 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 PPP1R12AO14974 1030 aaPredicted RBP18.77■□□□□ 0.6
FAM49B-208ENST00000518344 PJA2O43164 708 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 CST8O60676 142 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 HLA-DQB2P05538 268 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 CES1P23141 567 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 PDE1CQ14123 709 aaPredicted RBP18.77■□□□□ 0.6
FAM49B-208ENST00000518344 LRRC14Q15048 493 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 ZNF542PQ5EBM4 170 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 ARMC12Q5T9G4 340 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 TP53I13Q8NBR0 393 aaPredicted RBP18.77■□□□□ 0.6
FAM49B-208ENST00000518344 KIAA1524Q8TCG1 905 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 SEPT10Q9P0V9 454 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 SAE1Q9UBE0 346 aaPredicted RBP18.77■□□□□ 0.6
FAM49B-208ENST00000518344 AMACRQ9UHK6 382 aa18.77■□□□□ 0.6
FAM49B-208ENST00000518344 ASCC3Q8N3C0 2202 aaKnown RBP18.76■□□□□ 0.59
FAM49B-208ENST00000518344 PGLSO95336 258 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 ELFN1P0C7U0 828 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 NFKBIAP25963 317 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 PMLP29590 882 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 IGFALSP35858 605 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 KIF5AQ12840 1032 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 RALGDSQ12967 914 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 IRF4Q15306 451 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 TAZQ16635 292 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 FAM182AQ5T1J6 154 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 LIPIQ6XZB0 460 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 DPPA4Q7L190 304 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 TXLNBQ8N3L3 684 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 EID2Q8N6I1 236 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 EXD1Q8NHP7 514 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 RBM41Q96IZ5 413 aaKnown RBP18.76■□□□□ 0.59
FAM49B-208ENST00000518344 CEP41Q9BYV8 373 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 DNAJC28Q9NX36 388 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 B4GALT6Q9UBX8 382 aa18.76■□□□□ 0.59
FAM49B-208ENST00000518344 A0A0U1RQJ8 604 aa18.75■□□□□ 0.59
FAM49B-208ENST00000518344 SPTY2D1-AS1A0A0U1RR47 76 aa18.75■□□□□ 0.59
FAM49B-208ENST00000518344 MACROD2A1Z1Q3 448 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms