RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 BRMS1LQ5PSV4 323 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PIK3R6Q5UE93 754 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 FAM109BQ6ICB4 259 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ANKRD26P1Q6NSI1 321 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TTI2Q6NXR4 508 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 GADL1Q6ZQY3 521 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 MFSD6Q6ZSS7 791 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PLEKHM3Q6ZWE6 761 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 BNIPLQ7Z465 357 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 IGFN1Q86VF2 1251 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 VPS37DQ86XT2 251 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 MIB1Q86YT6 1006 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 NUDCD3Q8IVD9 361 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZCCHC7Q8N3Z6 543 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 LRRC71Q8N4P6 559 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CCDC33Q8N5R6 958 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CAMKK1Q8N5S9 505 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC15A4Q8N697 577 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PACRGLQ8N7B6 248 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF565Q8N9K5 539 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 KCNH5Q8NCM2 988 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 OR8K5Q8NH50 307 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 RASGRP4Q8TDF6 673 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 APBB2Q92870 758 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARHGEF26Q96DR7 871 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TOE1Q96GM8 510 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZDHHC12Q96GR4 267 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 HES6Q96HZ4 224 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 MAGEB10Q96LZ2 347 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CNBD2Q96M20 576 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 KCNC2Q96PR1 638 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PANX3Q96QZ0 392 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TMEM246Q9BRR3 403 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 THTPAQ9BU02 230 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TARS2Q9BW92 718 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 LSM14BQ9BX40 385 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 IL25Q9H293 177 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 LHX5Q9H2C1 402 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 DBNDD1Q9H9R9 158 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 EFCAB1Q9HAE3 211 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF556Q9HAH1 456 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TIGARQ9NQ88 270 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRDM8Q9NQV8 689 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ANLNQ9NQW6 1124 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PCDHB16Q9NRJ7 776 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CHST7Q9NS84 486 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 IARS2Q9NSE4 1012 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 DDX28Q9NUL7 540 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARL8BQ9NVJ2 186 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 BABAM1Q9NWV8 329 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 UCKL1Q9NWZ5 548 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 SIRT5Q9NXA8 310 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ING3Q9NXR8 418 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 GPRC5BQ9NZH0 403 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 VPS54Q9P1Q0 977 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 FETUBQ9UGM5 382 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TEKT2Q9UIF3 430 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 DBR1Q9UK59 544 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CLEC4AQ9UMR7 237 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 DUSP12Q9UNI6 340 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 DIMT1Q9UNQ2 313 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PA2G4Q9UQ80 394 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 VWA7Q9Y334 891 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TRAF6Q9Y4K3 522 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ASB4Q9Y574 426 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 KLF2Q9Y5W3 355 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 EMSYQ7Z589 1322 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 STK36Q9NRP7 1315 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CPDO75976 1380 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PLCH2O75038 1416 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARHGAP23Q9P227 1491 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 NFAT5O94916 1531 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 AGLP35573 1532 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PREX1Q8TCU6 1659 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 SPHKAPQ2M3C7 1700 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 MYH6P13533 1939 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 UNC13BO14795 1591 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 DLC1Q96QB1 1528 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PTPRUQ92729 1446 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZMYM2Q9UBW7 1377 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 A0A1B0GWJ7 208 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARHGEF37A1IGU5 675 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 HEATR9A2RTY3 570 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 F8W036 122 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZBTB5O15062 677 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 CLN5O75503 358 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 POP4O95707 220 aaKnown RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 NDST3O95803 873 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT2B4P06133 528 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 SYPP08247 313 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 BMP7P18075 431 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 DDOSTP39656 456 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 MAPK12P53778 367 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PMS1P54277 932 aaKnown RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 TSPAN5P62079 268 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 CSNK2BP67870 215 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 GABREP78334 506 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 GSTO1P78417 241 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF200P98182 395 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms