RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ATP6AP2A0A1C7CYW4 349 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 MOXD2PA6NHM9 499 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 TMEM88BA6NKF7 163 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 SEC22BO75396 215 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 ATP6AP2O75787 350 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 ABCB1P08183 1280 aaPredicted RBP10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 OR4Q2P0C623 313 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 HDCP19113 662 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 CDK18Q07002 472 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 NADK2Q4G0N4 442 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 MBLAC2Q68D91 279 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 RGMBQ6NW40 437 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 DHFR2Q86XF0 187 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 MTMR14Q8NCE2 650 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 TMEM159Q96B96 161 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 FAM120BQ96EK7 910 aaKnown RBP10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 KLHL5Q96PQ7 755 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 QKIQ96PU8 341 aaKnown RBP eCLIP10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 CSPG4P5Q96PW8 444 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 TWNKQ96RR1 684 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 CDK5RAP1Q96SZ6 601 aaKnown RBP10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 DUSP16Q9BY84 665 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 MRPL9Q9BYD2 267 aaKnown RBP10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 PAIP1Q9H074 479 aaKnown RBP10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 CROTQ9UKG9 612 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 ANKRD6Q9Y2G4 727 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 NDUFAF1Q9Y375 327 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZNF839A8K0R7 811 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 TRMUO75648 421 aaKnown RBP10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 KRT6AP02538 564 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 KRT6BP04259 564 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 ELNP15502 786 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 KRT6CP48668 564 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 PRKAA2P54646 552 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 SP3Q02447 781 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 HSPA14Q0VDF9 509 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 POM121L1PQ3SYA9 428 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 ARMC12Q5T9G4 340 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 LRRC8DQ7L1W4 858 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 CAND1Q86VP6 1230 aaKnown RBP10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 KCTD4Q8WVF5 259 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 STYXL1Q9Y6J8 313 aa10.9□□□□□ -0.66
PCDHGA1-202ENST00000517417 BRWD3Q6RI45 1802 aa10.9□□□□□ -0.67
PCDHGA1-202ENST00000517417 SOWAHBA6NEL2 793 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 MSI1O43347 362 aaKnown RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 C2P06681 752 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 HOXC6P09630 235 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ADGRE1Q14246 886 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 PMF1Q6P1K2 205 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 RD3Q7Z3Z2 195 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 MILR1Q7Z6M3 343 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 CENPLQ8N0S6 344 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNF614Q8N883 585 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ATAD1Q8NBU5 361 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 TNIP2Q8NFZ5 429 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 FIG4Q92562 907 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 POLG2Q9UHN1 485 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 SF3B1O75533 1304 aaKnown RBP eCLIP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 MLNP12872 115 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 VAC14Q08AM6 782 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZBTB17Q13105 803 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 LIPMQ5VYY2 423 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ERAP2Q6P179 960 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 KLHDC10Q6PID8 442 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 LCLAT1Q6UWP7 414 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 DRAXINQ8NBI3 349 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 OR52K2Q8NGK3 314 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 TMEM174Q8WUU8 243 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 DPF3Q92784 378 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 HGH1Q9BTY7 390 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 RMND5AQ9H871 391 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 PREBQ9HCU5 417 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 GIMAP4Q9NUV9 329 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNF214Q9UL59 606 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 PDZK1P1A8MUH7 402 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 OCM2P0CE71 109 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 OCMP0CE72 109 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 MSH3P20585 1137 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ADRA1BP35368 520 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 GPD2P43304 727 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 SERPINB10P48595 397 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ALDH9A1P49189 494 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 SLC16A1P53985 500 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 CCNIQ14094 377 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 HECTD3Q5T447 861 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 METTL21CQ5VZV1 264 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 RSPH1Q8WYR4 309 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 CASP10Q92851 521 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 AZIN2Q96A70 460 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ABHD8Q96I13 439 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 KCTD15Q96SI1 283 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 SMAD5Q99717 465 aaKnown RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 NIFKQ9BYG3 293 aaKnown RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNF112Q9UJU3 913 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 TELO2Q9Y4R8 837 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 RAD51BO15315 384 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 FGF10O15520 208 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 IL1BP01584 269 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 F7P08709 466 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 TFEBP19484 476 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms