RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 RRP1BQ14684 758 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 NR1I3Q14994 352 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 DLG2Q15700 870 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 LY6KQ17RY6 165 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 COL28A1Q2UY09 1125 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 KCTD21Q4G0X4 260 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 AASDHQ4L235 1098 aaPredicted RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 AARDQ4LEZ3 155 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 MDH1BQ5I0G3 518 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 NOMO2Q5JPE7 1267 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZNF648Q5T619 568 aaPredicted RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PLA2G4FQ68DD2 849 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 TAPT1Q6NXT6 567 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 GJB7Q6PEY0 223 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PSRC1Q6PGN9 363 aaPredicted RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 AFTPHQ6ULP2 937 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 CFAP77Q6ZQR2 320 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 MOB3CQ70IA8 216 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 TAOK1Q7L7X3 1001 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 TRAPPC11Q7Z392 1133 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 TLK2Q86UE8 772 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 GPAT4Q86UL3 456 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 CMTM4Q8IZR5 234 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 HJURPQ8NCD3 748 aaPredicted RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 CCNYQ8ND76 341 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 FLAD1Q8NFF5 587 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 OR52E1Q8NGJ3 308 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 CFAP61Q8NHU2 1237 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 AGR3Q8TD06 166 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 CHURC1Q8WUH1 139 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ST8SIA2Q92186 375 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 KAT2AQ92830 837 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 SPACA9Q96E40 222 aaPredicted RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ALG14Q96F25 216 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PRR11Q96HE9 360 aaPredicted RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 RPL10LQ96L21 214 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZNF560Q96MR9 790 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 NPAS1Q99742 590 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 SEMA3CQ99985 751 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 TCF25Q9BQ70 676 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 H2AFJQ9BTM1 129 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 HDHD5Q9BXW7 423 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PDZD7Q9H5P4 517 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 C19orf44Q9H6X5 657 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 C7orf69Q9H7B7 122 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 CRLF2Q9HC73 371 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ASAH2Q9NR71 780 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 DNAJC11Q9NVH1 559 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ARL8BQ9NVJ2 186 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 DNAJC17Q9NVM6 304 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZNHIT6Q9NWK9 470 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PLK2Q9NYY3 685 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ERAP1Q9NZ08 941 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 VPS18Q9P253 973 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ANKMY1Q9P2S6 941 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 DDX25Q9UHL0 483 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 GPR160Q9UJ42 338 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 SLC25A13Q9UJS0 675 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 TMEM59LQ9UK28 342 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 CCPG1Q9ULG6 757 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 SNX6Q9UNH7 406 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 NUDCQ9Y266 331 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 R3HDM2Q9Y2K5 976 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ASB3Q9Y575 518 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 DHX29Q7Z478 1369 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZNF644Q9H582 1327 aaPredicted RBP4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 A0A0A6YYC8 382 aaPredicted RBP4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 DENND3A2RUS2 1198 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 LACTBL1A8MY62 500 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 C9orf172C9J069 976 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 CCDC188H7C350 402 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 I3L1I5 382 aaPredicted RBP4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 CTAGE5O15320 804 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 ST8SIA3O43173 380 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 GPC4O75487 556 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 CRCPO75575 148 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZWINTO95229 277 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 AK1P00568 194 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 ENO1P06733 434 aaKnown RBP4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 SPATA31D3P0C874 917 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 VSIG10L2P0DP72 767 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 IRF1P10914 325 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 ATF2P15336 505 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 ADRA2CP18825 462 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 MYF6P23409 242 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 DNASE1P24855 282 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 CD27P26842 260 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 HOXD10P28358 340 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 SFNP31947 248 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 CD151P48509 253 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 DGKQP52824 942 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 CDH13P55290 713 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 UCP2P55851 309 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZNF844Q08AG5 666 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 ACSM2AQ08AH3 577 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 MRPL49Q13405 166 aaKnown RBP4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 OLIG2Q13516 323 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 FGFBP1Q14512 234 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 VEPH1Q14D04 833 aa4.01□□□□□ -1.77
RNU4-60P-201ENST00000517239 CEBPEQ15744 281 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms