RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 PTPRN2Q92932 1015 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 HLA-CQ95604 372 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 ISG20Q96AZ6 181 aaKnown RBP12.03□□□□□ -0.48
LMNA-224ENST00000515711 VPS39Q96JC1 886 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 GPR22Q99680 433 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 PAIP2Q9BPZ3 127 aaKnown RBP12.03□□□□□ -0.48
LMNA-224ENST00000515711 MCMBPQ9BTE3 642 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 SLC2A11Q9BYW1 496 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 MFSD1Q9H3U5 465 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 SPHK2Q9NRA0 654 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 DCDC2Q9UHG0 476 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 SLC25A13Q9UJS0 675 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 GRID1Q9ULK0 1009 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 RPL26L1Q9UNX3 145 aaKnown RBP12.03□□□□□ -0.48
LMNA-224ENST00000515711 CCL26Q9Y258 94 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 ANKRD6Q9Y2G4 727 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 PSAT1Q9Y617 370 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 SCN8AQ9UQD0 1980 aa12.03□□□□□ -0.48
LMNA-224ENST00000515711 ERICH4A6NGS2 130 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 EPOPA6NHQ4 379 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 EBAG9O00559 213 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 TPP1O14773 563 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 PER2O15055 1255 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 HOXB8P17481 243 aaPredicted RBP12.02□□□□□ -0.49
LMNA-224ENST00000515711 TYK2P29597 1187 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 ETV4P43268 484 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 RGRP47804 291 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 GRIA4P48058 902 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 NRIP1P48552 1158 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 GALNT3Q14435 633 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 GRM3Q14832 879 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 TAF1AQ15573 450 aaPredicted RBP12.02□□□□□ -0.49
LMNA-224ENST00000515711 CNGA3Q16281 694 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 TAF1BQ53T94 588 aaPredicted RBP12.02□□□□□ -0.49
LMNA-224ENST00000515711 PITRM1Q5JRX3 1037 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 NEPROQ6NW34 567 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 LINGO4Q6UY18 593 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 CCDC91Q7Z6B0 441 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 ADGRD2Q7Z7M1 963 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 SRLQ86TD4 932 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 RBM23Q86U06 439 aaKnown RBP12.02□□□□□ -0.49
LMNA-224ENST00000515711 ZC3HC1Q86WB0 502 aaKnown RBP12.02□□□□□ -0.49
LMNA-224ENST00000515711 CACNA2D3Q8IZS8 1091 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 APCDD1Q8J025 514 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 DCLK2Q8N568 766 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.02□□□□□ -0.49
LMNA-224ENST00000515711 ANKS4BQ8N8V4 417 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 IRF7Q92985 503 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 EXOC2Q96KP1 924 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 LMLNQ96KR4 655 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 ZNF778Q96MU6 729 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 AGAP2Q99490 1192 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 KLF6Q99612 283 aaPredicted RBP12.02□□□□□ -0.49
LMNA-224ENST00000515711 C19orf43Q9BQ61 176 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 BBS2Q9BXC9 721 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 CEP44Q9C0F1 390 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 FAM107BQ9H098 131 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 SMG9Q9H0W8 520 aaKnown RBP12.02□□□□□ -0.49
LMNA-224ENST00000515711 MLXIPLQ9NP71 852 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 SNX15Q9NRS6 342 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 OBP2AQ9NY56 170 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 IL1RAPL1Q9NZN1 696 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 SLC17A6Q9P2U8 582 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 MID2Q9UJV3 735 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 CORO1CQ9ULV4 474 aaPredicted RBP12.02□□□□□ -0.49
LMNA-224ENST00000515711 HS3ST2Q9Y278 367 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 PLLPQ9Y342 182 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 RAI2Q9Y5P3 530 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 ACTL7AQ9Y615 435 aa12.02□□□□□ -0.49
LMNA-224ENST00000515711 ATXN2Q99700 1313 aaKnown RBP12.02□□□□□ -0.49
LMNA-224ENST00000515711 C2orf81A6NN90 581 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 TCP11X1B4DZS4 312 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 NEDD8-MDP1E9PL57 170 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 BIRC5O15392 142 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 LDB2O43679 373 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 RPP40O75818 363 aaKnown RBP12.01□□□□□ -0.49
LMNA-224ENST00000515711 GSRP00390 522 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 ALDOAP04075 364 aaKnown RBP12.01□□□□□ -0.49
LMNA-224ENST00000515711 PABPC1P11940 636 aaKnown RBP12.01□□□□□ -0.49
LMNA-224ENST00000515711 OGNP20774 298 aaKnown RBP12.01□□□□□ -0.49
LMNA-224ENST00000515711 PSMA3P25788 255 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 ARNTP27540 789 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 CD70P32970 193 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 SLC1A2P43004 574 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 CD151P48509 253 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 CLCN5P51795 746 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 KPNA2P52292 529 aaKnown RBP12.01□□□□□ -0.49
LMNA-224ENST00000515711 SNRPD1P62314 119 aaKnown RBP12.01□□□□□ -0.49
LMNA-224ENST00000515711 NTHL1P78549 312 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 FOXK2Q01167 660 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 PPARDQ03181 441 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 IHHQ14623 411 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 CCDC153Q494R4 210 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 ARMC12Q5T9G4 340 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 ZNF470Q6ECI4 717 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 FSTL4Q6MZW2 842 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 AFTPHQ6ULP2 937 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 GLT6D1Q7Z4J2 308 aa12.01□□□□□ -0.49
LMNA-224ENST00000515711 ARID3BQ8IVW6 561 aaPredicted RBP12.01□□□□□ -0.49
LMNA-224ENST00000515711 LRRC34Q8IZ02 419 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms