RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 NUF2Q9BZD4 464 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 MAGEH1Q9H213 219 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 VCXQ9H320 206 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 WDR55Q9H6Y2 383 aaPredicted RBP14.94□□□□□ -0.02
NUP54-217ENST00000514987 POPDC3Q9HBV1 291 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 STARD7Q9NQZ5 370 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 LRFN2Q9ULH4 789 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 WASF2Q9Y6W5 498 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 SRCAPQ6ZRS2 3230 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 VWA8A3KMH1 1905 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 F5H5T6 163 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 NEMP1O14524 444 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 ENPP3O14638 875 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 TBC1D4O60343 1298 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 SMNDC1O75940 238 aaKnown RBP eCLIP14.94□□□□□ -0.02
NUP54-217ENST00000514987 BAG2O95816 211 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 S1PR4O95977 384 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 ATXN1LP0C7T5 689 aaKnown RBP14.94□□□□□ -0.02
NUP54-217ENST00000514987 TACR2P21452 398 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 EPHA3P29320 983 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 ABL2P42684 1182 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 MAXP61244 160 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 NOGQ13253 232 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 CSHL1Q14406 222 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 ZNF460Q14592 562 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 MAPRE2Q15555 327 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 RBM20Q5T481 1227 aaKnown RBP14.94□□□□□ -0.02
NUP54-217ENST00000514987 RASIP1Q5U651 963 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 ALG1LQ6GMV1 187 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 FUT10Q6P4F1 479 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 SNX32Q86XE0 403 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 PDZD8Q8NEN9 1154 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 OVCA2Q8WZ82 227 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 FAM136AQ96C01 138 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 CASD1Q96PB1 797 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 SEPT5Q99719 369 aaPredicted RBP14.94□□□□□ -0.02
NUP54-217ENST00000514987 TTLL2Q9BWV7 592 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 EFCAB1Q9HAE3 211 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 CYP4F11Q9HBI6 524 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 HACD3Q9P035 362 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 POMPQ9Y244 141 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 A0A1W2PQ45 241 aaPredicted RBP14.93□□□□□ -0.02
NUP54-217ENST00000514987 A0A1W2PQY0 241 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 A6NHS1 94 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 ARVCFO00192 962 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 LDB2O43679 373 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 TLR5O60602 858 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 GLP2RO95838 553 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 TBX18O95935 607 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 SERPINF2P08697 491 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 CCDC166P0CW27 439 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 CES1P23141 567 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 ARPP19P56211 112 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 DSG1Q02413 1049 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 CCNIQ14094 377 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 RFTN1Q14699 578 aaPredicted RBP14.93□□□□□ -0.02
NUP54-217ENST00000514987 NXNQ6DKJ4 435 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 SDCCAG8Q86SQ7 713 aaPredicted RBP14.93□□□□□ -0.02
NUP54-217ENST00000514987 DHDDSQ86SQ9 333 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 PGBD5Q8N414 524 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 TTC9BQ8N6N2 239 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 BRSK1Q8TDC3 778 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 SEPT8Q92599 483 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 HDAC10Q969S8 669 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 ASB2Q96Q27 587 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 NR1H4Q96RI1 486 aaPredicted RBP14.93□□□□□ -0.02
NUP54-217ENST00000514987 TTC1Q99614 292 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 OLFM1Q99784 485 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 SEMA3CQ99985 751 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 GPR62Q9BZJ7 368 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 ZBTB26Q9HCK0 441 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 MRPL40Q9NQ50 206 aaKnown RBP14.93□□□□□ -0.02
NUP54-217ENST00000514987 STK39Q9UEW8 545 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 DNMT3LQ9UJW3 386 aa14.93□□□□□ -0.02
NUP54-217ENST00000514987 TTC3P53804 2025 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 GREB1Q4ZG55 1949 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 SLC38A8A6NNN8 435 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 RPP40O75818 363 aaKnown RBP14.92□□□□□ -0.02
NUP54-217ENST00000514987 WISP3O95389 354 aaPredicted RBP14.92□□□□□ -0.02
NUP54-217ENST00000514987 GNRH1P01148 92 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 HMBSP08397 361 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 HSPA1AP0DMV8 641 aaKnown RBP14.92□□□□□ -0.02
NUP54-217ENST00000514987 HSPA1BP0DMV9 641 aaKnown RBP14.92□□□□□ -0.02
NUP54-217ENST00000514987 OGNP20774 298 aaKnown RBP14.92□□□□□ -0.02
NUP54-217ENST00000514987 IMPDH1P20839 514 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 SLC11A1P49279 550 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 SLC11A2P49281 568 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 NUDT2P50583 147 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 BNC2Q6ZN30 1099 aaPredicted RBP14.92□□□□□ -0.02
NUP54-217ENST00000514987 PTAR1Q7Z6K3 402 aaPredicted RBP14.92□□□□□ -0.02
NUP54-217ENST00000514987 PGAM4Q8N0Y7 254 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 RAET1EQ8TD07 263 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 MICAL1Q8TDZ2 1067 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 SLC26A7Q8TE54 656 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 L3HYPDHQ96EM0 354 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 NDNQ99608 321 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 MARCH5Q9NX47 278 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 GTSE1Q9NYZ3 720 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.92□□□□□ -0.02
NUP54-217ENST00000514987 SEPT3Q9UH03 358 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms