RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, human

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSPAN17-208	ENST00000514705	IQCF3	P0C7M6	154 aa		13.97	□□□□□ -0.17
TSPAN17-208	ENST00000514705	RPL26	P61254	145 aa	Known RBP	13.97	□□□□□ -0.17
TSPAN17-208	ENST00000514705	LSM3	P62310	102 aa	Known RBP	13.97	□□□□□ -0.17
TSPAN17-208	ENST00000514705	BNIP3	Q12983	259 aa		13.97	□□□□□ -0.17
TSPAN17-208	ENST00000514705	HFE2	Q6ZVN8	426 aa		13.97	□□□□□ -0.17
TSPAN17-208	ENST00000514705	PNPLA1	Q8N8W4	532 aa		13.97	□□□□□ -0.17
TSPAN17-208	ENST00000514705	SLC29A1	Q99808	456 aa		13.97	□□□□□ -0.17
TSPAN17-208	ENST00000514705	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.97	□□□□□ -0.17
TSPAN17-208	ENST00000514705		A0A1B0GTW7	788 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705		A0A1W2PPW3	197 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	ARRB2	P32121	409 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	CHRNA4	P43681	627 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	CPT1A	P50416	773 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	C9orf57	Q5W0N0	161 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	CDC26	Q8NHZ8	85 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	HASPIN	Q8TF76	798 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	EMID1	Q96A84	441 aa	Predicted RBP	13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	C12orf43	Q96C57	262 aa	Known RBP	13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	NSMCE2	Q96MF7	247 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	VAT1	Q99536	393 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	C17orf80	Q9BSJ5	609 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	GBA3	Q9H227	469 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	ZNF696	Q9H7X3	374 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	GIMAP2	Q9UG22	337 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	SLC7A1	P30825	629 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	ADCYAP1R1	P41586	468 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	GLUD2	P49448	558 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	STEAP4	Q687X5	459 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	GPR142	Q7Z601	462 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	CATSPERB	Q9H7T0	1116 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	ANAPC2	Q9UJX6	822 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	RNF112	Q9ULX5	631 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705	TLL2	Q9Y6L7	1015 aa		13.96	□□□□□ -0.17
TSPAN17-208	ENST00000514705		A0A087X1B8	175 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	TSPAN1	O60635	241 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	ALDH1A2	O94788	518 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	FBXO21	O94952	628 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	ADSL	P30566	484 aa	Predicted RBP	13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CDK9	P50750	372 aa	Known RBP	13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CHRNB3	Q05901	458 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	SGO1	Q5FBB7	561 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CNST	Q6PJW8	725 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	TMEM26	Q6ZUK4	368 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	FRA10AC1	Q70Z53	315 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	GRIN3A	Q8TCU5	1115 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	SKA2	Q8WVK7	121 aa	Predicted RBP	13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	SOCS4	Q8WXH5	440 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	ZBTB18	Q99592	522 aa		13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	SOX17	Q9H6I2	414 aa	Predicted RBP	13.96	□□□□□ -0.18
TSPAN17-208	ENST00000514705	HTRA2	O43464	458 aa	Predicted RBP	13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	GRIK1	P39086	918 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	NAT16	Q8N8M0	369 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	SLC2A6	Q9UGQ3	507 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	FAM50B	Q9Y247	325 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	FAM72C	H0Y354	149 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CBFA2T3	O75081	653 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	DAB1	O75553	588 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CTSH	P09668	335 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	PIRT	P0C851	137 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	MTHFD1	P11586	935 aa	Known RBP	13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CCNA2	P20248	432 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	HK2	P52789	917 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	INCA1	Q0VD86	236 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	GPR158	Q5T848	1215 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	FAM72A	Q5TYM5	149 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	FAM72D	Q6L9T8	149 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CHSY3	Q70JA7	882 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	UTS2B	Q765I0	119 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	FAM72B	Q86X60	149 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	KBTBD7	Q8WVZ9	684 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	BORCS5	Q969J3	196 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	BDH2	Q9BUT1	245 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	C1orf50	Q9BV19	199 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	SEPT3	Q9UH03	358 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	EBF1	Q9UH73	591 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	OAZ3	Q9UMX2	235 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CDC14A	Q9UNH5	594 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	DGKB	Q9Y6T7	804 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705		E5RI56	91 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	EI24	O14681	340 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	S100B	P04271	92 aa	Predicted RBP	13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	ARSA	P15289	507 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CD1E	P15812	388 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	GLDC	P23378	1020 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	GRM5	P41594	1212 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	PRKCQ	Q04759	706 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	IMPG1	Q17R60	797 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	RGS21	Q2M5E4	152 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	EGFLAM	Q63HQ2	1017 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	DUSP16	Q9BY84	665 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	TBC1D13	Q9NVG8	400 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CACNA2D2	Q9NY47	1150 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	CD274	Q9NZQ7	290 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	SFMBT1	Q9UHJ3	866 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	BLOC1S6	Q9UL45	172 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	YJEFN3	A6XGL0	299 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	NDUFS3	O75489	264 aa		13.95	□□□□□ -0.18
TSPAN17-208	ENST00000514705	LRIG2	O94898	1065 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms