RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CBSP35520 551 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 PIP4K2AP48426 406 aaPredicted RBP5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 PLCD1P51178 756 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 ARHGEF6Q15052 776 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 MED22Q15528 200 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 C4orf50Q6ZRC1 276 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 QSOX2Q6ZRP7 698 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 PATL1Q86TB9 770 aaKnown RBP5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 PIM3Q86V86 326 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 SFTPA2Q8IWL1 248 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 SLC35F3Q8IY50 421 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 NEXN-AS1Q8NBZ9 246 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 TMEM116Q8NCL8 245 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 ARRDC2Q8TBH0 407 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 ERGIC1Q969X5 290 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 WDFY2Q96P53 400 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 MUC13Q9H3R2 512 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 CATSPERBQ9H7T0 1116 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 POLR1BQ9H9Y6 1135 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 PLEKHA5Q9HAU0 1116 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 MAGEE1Q9HCI5 957 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 SMYD2Q9NRG4 433 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 CYSLTR2Q9NS75 346 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 TBC1D22BQ9NU19 505 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 INSL5Q9Y5Q6 135 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 A0A1B0GVT2 93 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 RPS10-NUDT3A0A1W2PQS6 291 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 KDM4EB2RXH2 506 aaPredicted RBP5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 B4DGG1 531 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 RGS14O43566 566 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 DOK2O60496 412 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 COMPP49747 757 aaPredicted RBP5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 GPS2Q13227 327 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 EIF4A2Q14240 407 aaKnown RBP5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 CTTNQ14247 550 aaKnown RBP5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 FRG1Q14331 258 aaKnown RBP5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 TWIST1Q15672 202 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 CCNG2Q16589 344 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 TTI2Q6NXR4 508 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 MON1BQ7L1V2 547 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 ASB5Q8WWX0 329 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 FBXL8Q96CD0 374 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 HMCESQ96FZ2 354 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 CAMK1GQ96NX5 476 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 FAM234AQ9H0X4 552 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 PRKRIP1Q9H875 184 aaPredicted RBP5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 KIF9Q9HAQ2 790 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 DIAPH3Q9NSV4 1193 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 NFE2L3Q9Y4A8 694 aa5.31□□□□□ -1.56
HMGCS1-207ENST00000514610 FAM237BA0A1B0GVD1 139 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 INAFM1C9JVW0 142 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 H3BNX3 289 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 J3KR12 359 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 SOX30O94993 753 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 CCNDBP1O95273 360 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 HOXB5P09067 269 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 ACADMP11310 421 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 CDK4P11802 303 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 MYF6P23409 242 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 PIGAP37287 484 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 RFX2P48378 723 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 ADORA2A-AS1P86434 159 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 TCTN1Q2MV58 587 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 CXorf66Q5JRM2 361 aaPredicted RBP5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 MZT2BQ6NZ67 158 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 TSSK4Q6SA08 328 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 TECPR1Q7Z6L1 1165 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 PALB2Q86YC2 1186 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 PELI3Q8N2H9 469 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 ZCCHC9Q8N567 271 aaKnown RBP5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 MIGA1Q8NAN2 632 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 SMG7Q92540 1137 aaKnown RBP5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 USP6NLQ92738 828 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 MMABQ96EY8 250 aaPredicted RBP5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 MAP7D2Q96T17 732 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 BPIFA1Q9NP55 256 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 ASAH2Q9NR71 780 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 TMEM51Q9NW97 253 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 CISD1Q9NZ45 108 aaKnown RBP5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 HAO1Q9UJM8 370 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 CORO1CQ9ULV4 474 aaPredicted RBP5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 SRPRBQ9Y5M8 271 aaKnown RBP5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 SQORQ9Y6N5 450 aa5.3□□□□□ -1.56
HMGCS1-207ENST00000514610 RUSC2Q8N2Y8 1516 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 LIPT2A6NK58 231 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 EIF3CLB5ME19 914 aaKnown RBP5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 TIMM23O14925 209 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 SPRY3O43610 288 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 MMP2P08253 660 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 NFKBIAP25963 317 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 TM4SF1P30408 202 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 ARL3P36405 182 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 MLH1P40692 756 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 ENTPD1P49961 510 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 F2RL1P55085 397 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 C2orf68Q2NKX9 166 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 DPCR1Q3MIW9 517 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 FNBP1LQ5T0N5 605 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 FAM205BPQ63HN1 556 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 ANKRD54Q6NXT1 300 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms