RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 COQ6Q9Y2Z9 468 aa10.54□□□□□ -0.72
HMGXB3-205ENST00000514469 DOCK9Q9BZ29 2069 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 CFAP69A5D8W1 941 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 TPP1O14773 563 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 PRKCGP05129 697 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 CR2P20023 1033 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 AMPD1P23109 780 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 SERPINB6P35237 376 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 LIG3P49916 1009 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 PEX5P50542 639 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 RENBPP51606 427 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 E2F1Q01094 437 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 BCL2L1Q07817 233 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 SLC10A7Q0GE19 358 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 RALGDSQ12967 914 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 WSCD2Q2TBF2 565 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 CCDC122Q5T0U0 273 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 CDCP2Q5VXM1 449 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 DPPA4Q7L190 304 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 ATPAF2Q8N5M1 289 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 ZNF564Q8TBZ8 553 aaPredicted RBP10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 LMX1AQ8TE12 382 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 LRRC61Q9BV99 259 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 XPO4Q9C0E2 1151 aaKnown RBP10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 NRSN2Q9GZP1 204 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 TCEAL2Q9H3H9 227 aaPredicted RBP10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 NCKIPSDQ9NZQ3 722 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 RCOR3Q9P2K3 495 aaPredicted RBP10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 SPASTQ9UBP0 616 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 RALYQ9UKM9 306 aaKnown RBP10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 CLCA2Q9UQC9 943 aa10.53□□□□□ -0.72
HMGXB3-205ENST00000514469 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 TMEM110-MUSTN1A8MSY1 372 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 MYO1FO00160 1098 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 HTRA2O43464 458 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 LZTS3O60299 673 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 OPA1O60313 960 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 MAFKO60675 156 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 SOCS5O75159 536 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 GCATO75600 419 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 MT-CO3P00414 261 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 TPM3P06753 285 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 MYF5P13349 255 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 GM2AP17900 193 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 IL4RP24394 825 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 HSPA9P38646 679 aaKnown RBP10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 EIF4A3P38919 411 aaKnown RBP10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 SCNN1BP51168 640 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 DUSP3P51452 185 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 ARSEP51690 589 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 MTM1Q13496 603 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 TRIM14Q14142 442 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 ZNF235Q14590 738 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 NFATC4Q14934 902 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 RTP5Q14D33 572 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 NFKBIBQ15653 356 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 DEFB133Q30KQ1 61 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 PRRT3Q5FWE3 981 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 PGBD5Q8N414 524 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 IFI44Q8TCB0 444 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 NUDCD1Q96RS6 583 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 DNAJC7Q99615 494 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 MGME1Q9BQP7 344 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 BOCQ9BWV1 1114 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 SLC13A1Q9BZW2 595 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 SCUBE2Q9NQ36 999 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 EVA1BQ9NVM1 165 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 SALL4Q9UJQ4 1053 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 CABIN1Q9Y6J0 2220 aa10.52□□□□□ -0.73
HMGXB3-205ENST00000514469 TRPM6Q9BX84 2022 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 COL27A1Q8IZC6 1860 aaPredicted RBP10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 A0A087WV48 116 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 LMO7DNF2Z398 122 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 MFSD11O43934 449 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 PROSCO94903 275 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 PCCBP05166 539 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 CD48P09326 243 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 ELFN1P0C7U0 828 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 TSHRP16473 764 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 HK3P52790 923 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 CDH6P55285 790 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 KIAA1024LP59773 190 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 POLR2LP62875 67 aaKnown RBP10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 SEMG2Q02383 582 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 PPARDQ03181 441 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 DPYSL3Q14195 570 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 KRT81Q14533 505 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 INPP5AQ14642 412 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 SLC18A3Q16572 532 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 ALG11Q2TAA5 492 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 ASTE1Q2TB18 679 aaPredicted RBP10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 SKOR2Q2VWA4 1001 aaPredicted RBP10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 RALGPS1Q5JS13 557 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 C6orf132Q5T0Z8 1188 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 SPECC1LQ69YQ0 1117 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 GUSBP11Q6P575 273 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 LIPIQ6XZB0 460 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 CPNE8Q86YQ8 564 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms