RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 ANKRD66B4E2M5 251 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 CCL22O00626 93 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 SLC7A4O43246 635 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 TIMM44O43615 452 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 BUD23O43709 281 aaKnown RBP12.92□□□□□ -0.34
PVT1-203ENST00000513868 VIMP08670 466 aaKnown RBP12.92□□□□□ -0.34
PVT1-203ENST00000513868 SRCP12931 536 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 PSMA3P25788 255 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 GMPRP36959 345 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 CCT5P48643 541 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 STK19P49842 368 aaPredicted RBP12.92□□□□□ -0.34
PVT1-203ENST00000513868 GRM3Q14832 879 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 PPM1JQ5JR12 505 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 COL13A1Q5TAT6 717 aaPredicted RBP12.92□□□□□ -0.34
PVT1-203ENST00000513868 ZNF470Q6ECI4 717 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 PIGWQ7Z7B1 504 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 CPLX4Q7Z7G2 160 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 CMC1Q7Z7K0 106 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 ADIPOR2Q86V24 386 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 MFSD6LQ8IWD5 586 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 NPAS3Q8IXF0 933 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 PTPRN2Q92932 1015 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 HDAC10Q969S8 669 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 RMDN1Q96DB5 314 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 MRPL38Q96DV4 380 aaKnown RBP12.92□□□□□ -0.34
PVT1-203ENST00000513868 RPL10LQ96L21 214 aaKnown RBP12.92□□□□□ -0.34
PVT1-203ENST00000513868 TBATAQ96M53 351 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 CDCA3Q99618 268 aaPredicted RBP12.92□□□□□ -0.34
PVT1-203ENST00000513868 GPR22Q99680 433 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 TM6SF2Q9BZW4 377 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 VPS11Q9H270 941 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 MFSD1Q9H3U5 465 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 CAB39LQ9H9S4 337 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 SNX15Q9NRS6 342 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 FBXO5Q9UKT4 447 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 EMCNQ9ULC0 261 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 HS3ST2Q9Y278 367 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 COL4A3Q01955 1670 aa12.92□□□□□ -0.34
PVT1-203ENST00000513868 PABPC1P11940 636 aaKnown RBP12.91□□□□□ -0.34
PVT1-203ENST00000513868 BMP1P13497 986 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 TYK2P29597 1187 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 SLC8A1P32418 973 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 VIPR2P41587 438 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 SERPINB8P50452 374 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 ZNF140P52738 457 aaPredicted RBP12.91□□□□□ -0.34
PVT1-203ENST00000513868 AP1S1P61966 158 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 LAMB3Q13751 1172 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 THOC5Q13769 683 aaKnown RBP12.91□□□□□ -0.34
PVT1-203ENST00000513868 PTPRRQ15256 657 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 FAM78AQ5JUQ0 283 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 RARS2Q5T160 578 aaKnown RBP12.91□□□□□ -0.34
PVT1-203ENST00000513868 TMEM215Q68D42 235 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 TMEM184AQ6ZMB5 413 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 KIAA1958Q8N8K9 716 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 PNPLA1Q8N8W4 532 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 LPCAT1Q8NF37 534 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 OR13C4Q8NGS5 318 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 ZNF75CPQ92670 426 aaPredicted RBP12.91□□□□□ -0.34
PVT1-203ENST00000513868 FGF13Q92913 245 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 DNAJC1Q96KC8 554 aaKnown RBP12.91□□□□□ -0.34
PVT1-203ENST00000513868 FAM167BQ9BTA0 163 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 SUDS3Q9H7L9 328 aaPredicted RBP12.91□□□□□ -0.34
PVT1-203ENST00000513868 FGFR1OP2Q9NVK5 253 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 EVLQ9UI08 416 aaPredicted RBP12.91□□□□□ -0.34
PVT1-203ENST00000513868 GGA2Q9UJY4 613 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 DENND4AQ7Z401 1863 aa12.91□□□□□ -0.34
PVT1-203ENST00000513868 OR51F1A6NGY5 319 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 TRAFD1O14545 582 aaPredicted RBP12.9□□□□□ -0.34
PVT1-203ENST00000513868 SLC9A3R1O14745 358 aaPredicted RBP12.9□□□□□ -0.34
PVT1-203ENST00000513868 TRIM24O15164 1050 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 LINC01565O15544 149 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 HAUS5O94927 633 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 GSRP00390 522 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 FSHRP23945 695 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 LEPRP48357 1165 aaKnown RBP12.9□□□□□ -0.34
PVT1-203ENST00000513868 DHCR24Q15392 516 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 TAF1AQ15573 450 aaPredicted RBP12.9□□□□□ -0.34
PVT1-203ENST00000513868 DLG2Q15700 870 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 UGP2Q16851 508 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 EML3Q32P44 896 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 ZNF789Q5FWF6 425 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 CGB2Q6NT52 195 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 KIAA0408Q6ZU52 694 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 GPR149Q86SP6 731 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 CLEC14AQ86T13 490 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 METTL3Q86U44 580 aaKnown RBP12.9□□□□□ -0.34
PVT1-203ENST00000513868 CAMK1DQ8IU85 385 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.9□□□□□ -0.34
PVT1-203ENST00000513868 OR6K2Q8NGY2 324 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 STYXQ8WUJ0 223 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 PIH1D2Q8WWB5 315 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 ISG20Q96AZ6 181 aaKnown RBP12.9□□□□□ -0.34
PVT1-203ENST00000513868 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 ASB16Q96NS5 453 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 ADGRE3Q9BY15 652 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 TNKS2Q9H2K2 1166 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 IGFLR1Q9H665 355 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 DZANK1Q9NVP4 752 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 NLE1Q9NVX2 485 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms