RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 DENND6BQ8NEG7 585 aa17.87■□□□□ 0.45
DDR1-272ENST00000513243 TPCN2Q8NHX9 752 aa17.87■□□□□ 0.45
DDR1-272ENST00000513243 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.87■□□□□ 0.45
DDR1-272ENST00000513243 SPOCK2Q92563 424 aa17.87■□□□□ 0.45
DDR1-272ENST00000513243 HDAC11Q96DB2 347 aa17.87■□□□□ 0.45
DDR1-272ENST00000513243 LACRTQ9GZZ8 138 aa17.87■□□□□ 0.45
DDR1-272ENST00000513243 GPR27Q9NS67 375 aa17.87■□□□□ 0.45
DDR1-272ENST00000513243 RBM22Q9NW64 420 aaKnown RBP eCLIP17.87■□□□□ 0.45
DDR1-272ENST00000513243 HEY1Q9Y5J3 304 aa17.87■□□□□ 0.45
DDR1-272ENST00000513243 SHROOM3Q8TF72 1996 aa17.87■□□□□ 0.45
DDR1-272ENST00000513243 APOL1O14791 398 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 PSTPIP1O43586 416 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 SOCS5O75159 536 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 ITGAVP06756 1048 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 CCNB1P14635 433 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 CDKN2BP42772 138 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 LIG3P49916 1009 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 TRAF2Q12933 501 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 RALGDSQ12967 914 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 TAZQ16635 292 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 RALGPS1Q5JS13 557 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 GLRX5Q86SX6 157 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 RFX6Q8HWS3 928 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 CCNYQ8ND76 341 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 LGMNQ99538 433 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 SEMA3CQ99985 751 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 CAAP1Q9H8G2 361 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 MBNL1Q9NR56 388 aaKnown RBP17.86■□□□□ 0.45
DDR1-272ENST00000513243 COQ6Q9Y2Z9 468 aa17.86■□□□□ 0.45
DDR1-272ENST00000513243 ANKRD36A6QL64 1941 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 C6P13671 934 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 ZFXP17010 805 aaPredicted RBP17.85■□□□□ 0.45
DDR1-272ENST00000513243 IGFALSP35858 605 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 RABIFP47224 123 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 MARCKSL1P49006 195 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 VAV2P52735 878 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 PFN3P60673 137 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 PPIDQ08752 370 aaKnown RBP17.85■□□□□ 0.45
DDR1-272ENST00000513243 ITKQ08881 620 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 IHHQ14623 411 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 ALG1LQ6GMV1 187 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 NPNTQ6UXI9 565 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 KANSL1Q7Z3B3 1105 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 DAAM2Q86T65 1068 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 DCP2Q8IU60 420 aaKnown RBP17.85■□□□□ 0.45
DDR1-272ENST00000513243 CCDC13Q8IYE1 715 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 TP53I13Q8NBR0 393 aaPredicted RBP17.85■□□□□ 0.45
DDR1-272ENST00000513243 PDCD6IPQ8WUM4 868 aaKnown RBP17.85■□□□□ 0.45
DDR1-272ENST00000513243 ZNF830Q96NB3 372 aaPredicted RBP17.85■□□□□ 0.45
DDR1-272ENST00000513243 CDC6Q99741 560 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 C1QTNF7Q9BXJ2 289 aa17.85■□□□□ 0.45
DDR1-272ENST00000513243 POLR1EQ9GZS1 481 aaKnown RBP17.85■□□□□ 0.45
DDR1-272ENST00000513243 SPTY2D1-AS1A0A0U1RR47 76 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 A0A1W2PQ67 120 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 BTNL10A8MVZ5 291 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 A8MX80 341 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 KCNK1O00180 336 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 PJA2O43164 708 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 SDC3O75056 442 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 TOP3BO95985 862 aaKnown RBP17.84■□□□□ 0.45
DDR1-272ENST00000513243 KRT10P13645 584 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 DYNLT1P63172 113 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 DSC2Q02487 901 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 FOXC1Q12948 553 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 FZD2Q14332 565 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 LLGL1Q15334 1064 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 WSCD2Q2TBF2 565 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 INAVAQ3KP66 663 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 TPRG1LQ5T0D9 272 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 LIPIQ6XZB0 460 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 SPOCD1Q6ZMY3 1216 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 DPPA4Q7L190 304 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 KATNAL2Q8IYT4 538 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.84■□□□□ 0.45
DDR1-272ENST00000513243 ARRDC2Q8TBH0 407 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 KRT35Q92764 455 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 OLFM3Q96PB7 478 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 AMACRQ9UHK6 382 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 WASF3Q9UPY6 502 aa17.84■□□□□ 0.45
DDR1-272ENST00000513243 CFAP69A5D8W1 941 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 LZTS3O60299 673 aaPredicted RBP17.83■□□□□ 0.44
DDR1-272ENST00000513243 ZRANB2O95218 330 aaKnown RBP eCLIP17.83■□□□□ 0.44
DDR1-272ENST00000513243 PGLSO95336 258 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 CPP00450 1065 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 JCHAINP01591 159 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 HLA-DQB2P05538 268 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 NAP1L1P55209 391 aaKnown RBP17.83■□□□□ 0.44
DDR1-272ENST00000513243 SHC2P98077 582 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 NIPAL4Q0D2K0 466 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 PDE1CQ14123 709 aaPredicted RBP17.83■□□□□ 0.44
DDR1-272ENST00000513243 TFDP2Q14188 446 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 LRRC14Q15048 493 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 AGERQ15109 404 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 PDK1Q15118 436 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 IRF4Q15306 451 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 ZNF542PQ5EBM4 170 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 FAM182AQ5T1J6 154 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 KAZNQ674X7 775 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 KIAA1328Q86T90 577 aa17.83■□□□□ 0.44
DDR1-272ENST00000513243 SLCO6A1Q86UG4 719 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms