RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CST6Q15828 149 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 QPCTQ16769 361 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 CFAP58Q5T655 872 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 CWF19L1Q69YN2 538 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 BRAT1Q6PJG6 821 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 CCNI2Q6ZMN8 369 aaPredicted RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 ZCCHC9Q8N567 271 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 SLC25A41Q8N5S1 370 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 LPCAT1Q8NF37 534 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 FLCNQ8NFG4 579 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 ERLEC1Q96DZ1 483 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 IER2Q9BTL4 223 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 FOXP3Q9BZS1 431 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 MKRN2Q9H000 416 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 MFSD1Q9H3U5 465 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 POLR3BQ9NW08 1133 aaPredicted RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 RAB21Q9UL25 225 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 NFU1Q9UMS0 254 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 PHTF1Q9UMS5 762 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 PPIL1Q9Y3C6 166 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 C16orf96A6NNT2 1141 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 KPNA3O00505 521 aaPredicted RBP12.61□□□□□ -0.39
PDPN-210ENST00000513143 ADH1BP00325 375 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 CPP00450 1065 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 PDGFBP01127 241 aaPredicted RBP12.61□□□□□ -0.39
PDPN-210ENST00000513143 PYGBP11216 843 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 TIMP2P16035 220 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 C5AR1P21730 350 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 MCM3P25205 808 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 SLC8A1P32418 973 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 MAGEA9P43362 315 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 PSMD8P48556 350 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 NPY2RP49146 381 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 METAP1P53582 386 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 EPHB1P54762 984 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 ARL4CP56559 192 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 ZBTB16Q05516 673 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 MSLNQ13421 630 aaPredicted RBP12.61□□□□□ -0.39
PDPN-210ENST00000513143 HIF1AQ16665 826 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 UGP2Q16851 508 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 FNBP1LQ5T0N5 605 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 PARS2Q7L3T8 475 aaKnown RBP12.61□□□□□ -0.39
PDPN-210ENST00000513143 TMPRSS6Q8IU80 811 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 PDIK1LQ8N165 341 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 SPEM1Q8N4L4 309 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 DNAAF3Q8N9W5 541 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.61□□□□□ -0.39
PDPN-210ENST00000513143 ARRDC3Q96B67 414 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 RMDN1Q96DB5 314 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 PPP1R16AQ96I34 528 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 PWWP2AQ96N64 755 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 PHACTR1Q9C0D0 580 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 POLMQ9NP87 494 aaPredicted RBP12.61□□□□□ -0.39
PDPN-210ENST00000513143 PIH1D1Q9NWS0 290 aaKnown RBP12.61□□□□□ -0.39
PDPN-210ENST00000513143 DLGAP2Q9P1A6 1054 aa12.61□□□□□ -0.39
PDPN-210ENST00000513143 MTRF1LQ9UGC7 380 aaKnown RBP12.61□□□□□ -0.39
PDPN-210ENST00000513143 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 A0A0C4DFX4 3053 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 TTC28Q96AY4 2481 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 A0A0J9YYE9 177 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 TCRBV21S2A2A0A5A6 115 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 TMEM221A6NGB7 291 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 E7ESA3 106 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 M0R296 226 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 AVILO75366 819 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 TRBC1P01850 177 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 DCNP07585 359 aaKnown RBP12.6□□□□□ -0.39
PDPN-210ENST00000513143 MYBL2P10244 700 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 TPH1P17752 444 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 DRD3P35462 400 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 SESN2P58004 480 aaPredicted RBP12.6□□□□□ -0.39
PDPN-210ENST00000513143 POM121L1PQ3SYA9 428 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 NDUFAF2Q8N183 169 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 PAF1Q8N7H5 531 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 SCRN2Q96FV2 425 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 MRGPRX1Q96LB2 322 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 MCCC1Q96RQ3 725 aaPredicted RBP12.6□□□□□ -0.39
PDPN-210ENST00000513143 FMO2Q99518 471 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 HDAC8Q9BY41 377 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 TSPYL1Q9H0U9 437 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 MAGEE1Q9HCI5 957 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 DYRK4Q9NR20 520 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 C2orf42Q9NWW7 574 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 BFARQ9NZS9 450 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 SCML1Q9UN30 329 aa12.6□□□□□ -0.39
PDPN-210ENST00000513143 CAPN8A6NHC0 703 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 SDR42E2A6NKP2 422 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 UPK3BL1B0FP48 263 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 UPK3BL2E5RIL1 263 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 MID1O15344 667 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 EIF3HO15372 352 aaKnown RBP eCLIP12.59□□□□□ -0.39
PDPN-210ENST00000513143 PI15O43692 258 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 DNTTP04053 509 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 GABRG2P18507 467 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 NDUFV2P19404 249 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 AOC1P19801 751 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 MGAT1P26572 445 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 SUOXP51687 545 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms