RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 MED8Q96G25 268 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 PCMTD1Q96MG8 357 aaPredicted RBP12.69□□□□□ -0.38
VEGFA-216ENST00000512683 CCDC3Q9BQI4 270 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 MAGEB5Q9BZ81 275 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 CLPBQ9H078 707 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 NOL6Q9H6R4 1146 aaKnown RBP12.69□□□□□ -0.38
VEGFA-216ENST00000512683 CPNE5Q9HCH3 593 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 MBNL1Q9NR56 388 aaKnown RBP12.69□□□□□ -0.38
VEGFA-216ENST00000512683 KCTD5Q9NXV2 234 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.69□□□□□ -0.38
VEGFA-216ENST00000512683 ACTL7AQ9Y615 435 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 DGKBQ9Y6T7 804 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 CFAP46Q8IYW2 2715 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 A0A1W2PNU3 283 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-216ENST00000512683 TCRBV5S1A1TA0A578 114 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 RASA4BC9J798 803 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 PDE2AO00408 941 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-216ENST00000512683 PLD2O14939 933 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 TEX33O43247 280 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 RASA4O43374 803 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 TNFP01375 233 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 KELP23276 732 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 CCKBRP32239 447 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 ZNF135P52742 658 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-216ENST00000512683 MTM1Q13496 603 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 C1orf61Q13536 156 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 NFATC4Q14934 902 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 CYTH1Q15438 398 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 WSCD2Q2TBF2 565 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 ANO6Q4KMQ2 910 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 ATXN7L2Q5T6C5 722 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-216ENST00000512683 MON1BQ7L1V2 547 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 ZNF354CQ86Y25 554 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 RBFAQ8N0V3 343 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 CCDC185Q8N715 623 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 CCNL2Q96S94 520 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-216ENST00000512683 AGPAT1Q99943 283 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 CNPY3Q9BT09 278 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 SYT11Q9BT88 431 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 APOOQ9BUR5 198 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 GULP1Q9UBP9 304 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 GGT7Q9UJ14 662 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 APPL1Q9UKG1 709 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 ATXN7L1Q9ULK2 861 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-216ENST00000512683 ITM2BQ9Y287 266 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 BPTFQ12830 3046 aa12.68□□□□□ -0.38
VEGFA-216ENST00000512683 TRPM6Q9BX84 2022 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 TDRD6O60522 2096 aaKnown RBP12.67□□□□□ -0.38
VEGFA-216ENST00000512683 A0A1W2PQ67 120 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 NVLO15381 856 aaKnown RBP12.67□□□□□ -0.38
VEGFA-216ENST00000512683 ZW10O43264 779 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 SFTPCP11686 197 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 GLB1P16278 677 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 SRP54P61011 504 aaKnown RBP12.67□□□□□ -0.38
VEGFA-216ENST00000512683 INPP5AQ14642 412 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 RFTN1Q14699 578 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-216ENST00000512683 CLPPQ16740 277 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-216ENST00000512683 CFAP58Q5T655 872 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 TMCO4Q5TGY1 634 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 ENPP7Q6UWV6 458 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 RAB11FIP2Q7L804 512 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 IRF2BP2Q7Z5L9 587 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 HID1Q8IV36 788 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 FBXO39Q8N4B4 442 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 GPR156Q8NFN8 814 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 SPOCK2Q92563 424 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 WDR92Q96MX6 357 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 GFM1Q96RP9 751 aaKnown RBP12.67□□□□□ -0.38
VEGFA-216ENST00000512683 RBM15Q96T37 977 aaKnown RBP eCLIP12.67□□□□□ -0.382e-18■□□□□ 10.3
VEGFA-216ENST00000512683 NCAPGQ9BPX3 1015 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 BPIFA3Q9BQP9 254 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 TCEAL2Q9H3H9 227 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-216ENST00000512683 RTN4Q9NQC3 1192 aaKnown RBP12.67□□□□□ -0.38
VEGFA-216ENST00000512683 UBA2Q9UBT2 640 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-216ENST00000512683 FZD10Q9ULW2 581 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 GPR34Q9UPC5 381 aa12.67□□□□□ -0.38
VEGFA-216ENST00000512683 CACNB4O00305 520 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-216ENST00000512683 TRIM23P36406 574 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 KIAA1024LP59773 190 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 CLN3Q13286 438 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 PEX6Q13608 980 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 IRF4Q15306 451 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
VEGFA-216ENST00000512683 ALG11Q2TAA5 492 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 PPP1R15BQ5SWA1 713 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 SCYL2Q6P3W7 929 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 PSTKQ8IV42 348 aaKnown RBP12.66□□□□□ -0.38
VEGFA-216ENST00000512683 LRRN3Q9H3W5 708 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 LRRC19Q9H756 370 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 ATP13A3Q9H7F0 1226 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 CAAP1Q9H8G2 361 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 PCDH12Q9NPG4 1184 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 SEPT10Q9P0V9 454 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 KLQ9UEF7 1012 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 PNMA8BQ9ULN7 279 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-216ENST00000512683 ATP8A1Q9Y2Q0 1164 aa12.66□□□□□ -0.38
VEGFA-216ENST00000512683 ASH1LQ9NR48 2969 aaKnown RBP12.65□□□□□ -0.38
VEGFA-216ENST00000512683 ARHGAP42A6NI28 874 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 PRAMEF11O60813 436 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 ITGB2P05107 769 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms