RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 KDELR1P24390 212 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 GARSP41250 739 aaKnown RBP13.38□□□□□ -0.27
RNF4-215ENST00000511843 RENBPP51606 427 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 PFN3P60673 137 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 AP1S1P61966 158 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 NSUN2Q08J23 767 aaKnown RBP eCLIP13.38□□□□□ -0.27
RNF4-215ENST00000511843 GALNT2Q10471 571 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 SLC10A2Q12908 348 aaPredicted RBP13.38□□□□□ -0.27
RNF4-215ENST00000511843 TRAF2Q12933 501 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 RALGDSQ12967 914 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 PAFAH1B3Q15102 231 aaKnown RBP13.38□□□□□ -0.27
RNF4-215ENST00000511843 PDK2Q15119 407 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 ST3GAL2Q16842 350 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 WSCD2Q2TBF2 565 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 MARC1Q5VT66 337 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 ERAP2Q6P179 960 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 RBFAQ8N0V3 343 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 PDCD6IPQ8WUM4 868 aaKnown RBP13.38□□□□□ -0.27
RNF4-215ENST00000511843 ASB12Q8WXK4 309 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 FAF2Q96CS3 445 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 NUDCD1Q96RS6 583 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 MGME1Q9BQP7 344 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 ZNF670Q9BS34 389 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 TCEAL2Q9H3H9 227 aaPredicted RBP13.38□□□□□ -0.27
RNF4-215ENST00000511843 GOLPH3Q9H4A6 298 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 SCUBE2Q9NQ36 999 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 A0A0U1RQS6 177 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 C3orf70A6NLC5 250 aaPredicted RBP13.37□□□□□ -0.27
RNF4-215ENST00000511843 SCAMP1O15126 338 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 MTA2O94776 668 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 DKK1O94907 266 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 PCCBP05166 539 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 GIMD1P0DJR0 217 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 CR2P20023 1033 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 RABIFP47224 123 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 EIF2B5Q13144 721 aaKnown RBP13.37□□□□□ -0.27
RNF4-215ENST00000511843 IHHQ14623 411 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 TCEA2Q15560 299 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 ZSCAN30Q86W11 494 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 PARGQ86W56 976 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 RHOT2Q8IXI1 618 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 PLA2G15Q8NCC3 412 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 DENND6BQ8NEG7 585 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 HCAR2Q8TDS4 363 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 NSMCE1Q8WV22 266 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 RNF25Q96BH1 459 aaPredicted RBP13.37□□□□□ -0.27
RNF4-215ENST00000511843 SMIM14Q96QK8 99 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 MSRB2Q9Y3D2 182 aa13.37□□□□□ -0.27
RNF4-215ENST00000511843 WDFY3Q8IZQ1 3526 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.36□□□□□ -0.27
RNF4-215ENST00000511843 SOWAHDA6NJG2 315 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 LZTS3O60299 673 aaPredicted RBP13.36□□□□□ -0.27
RNF4-215ENST00000511843 CPP00450 1065 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 KRT1P04264 644 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 GM2AP17900 193 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 COMTP21964 271 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 MAGEA1P43355 309 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 ACADVLP49748 655 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 SUOXP51687 545 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 THOP1P52888 689 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 DSC2Q02487 901 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 ITKQ08881 620 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 LRRC14Q15048 493 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 LLGL1Q15334 1064 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 DENND2CQ68D51 928 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 KCTD16Q68DU8 428 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 NPNTQ6UXI9 565 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 LIPIQ6XZB0 460 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 B4GALNT4Q76KP1 1039 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 DPPA4Q7L190 304 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 DCP2Q8IU60 420 aaKnown RBP13.36□□□□□ -0.27
RNF4-215ENST00000511843 MAP7D3Q8IWC1 876 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 PLD5Q8N7P1 536 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 ZNF548Q8NEK5 533 aaPredicted RBP13.36□□□□□ -0.27
RNF4-215ENST00000511843 FAM174AQ8TBP5 190 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 RNF157Q96PX1 679 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 SEMA3CQ99985 751 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 C1QTNF7Q9BXJ2 289 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 B4GALT6Q9UBX8 382 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 TTLL3Q9Y4R7 772 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 OR1A2Q9Y585 309 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 HEY1Q9Y5J3 304 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 USP24Q9UPU5 2620 aa13.36□□□□□ -0.27
RNF4-215ENST00000511843 KMT2BQ9UMN6 2715 aaPredicted RBP13.35□□□□□ -0.27
RNF4-215ENST00000511843 HTRA2O43464 458 aaPredicted RBP13.35□□□□□ -0.27
RNF4-215ENST00000511843 RFPL3O75679 317 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 RECQL5O94762 991 aaPredicted RBP13.35□□□□□ -0.27
RNF4-215ENST00000511843 CSF2P04141 144 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 PROS1P07225 676 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 PDHA1P08559 390 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 ELFN1P0C7U0 828 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 NME1P15531 152 aaKnown RBP13.35□□□□□ -0.27
RNF4-215ENST00000511843 JUNDP17535 347 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 CTPS1P17812 591 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 HSPA9P38646 679 aaKnown RBP13.35□□□□□ -0.27
RNF4-215ENST00000511843 ARHGAP25P42331 645 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 NOP2P46087 812 aaKnown RBP13.35□□□□□ -0.27
RNF4-215ENST00000511843 DYNLT1P63172 113 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 C1orf61Q13536 156 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 INPP5AQ14642 412 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms