RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 HID1Q8IV36 788 aa23.04■■□□□ 1.28
SMAD5-207ENST00000511116 GPR156Q8NFN8 814 aa23.04■■□□□ 1.28
SMAD5-207ENST00000511116 CCNL2Q96S94 520 aaPredicted RBP23.04■■□□□ 1.28
SMAD5-207ENST00000511116 RBM15Q96T37 977 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMAD5-207ENST00000511116 SUV39H2Q9H5I1 410 aa23.04■■□□□ 1.28
SMAD5-207ENST00000511116 PCDH12Q9NPG4 1184 aa23.04■■□□□ 1.28
SMAD5-207ENST00000511116 ADAM22Q9P0K1 906 aa23.04■■□□□ 1.28
SMAD5-207ENST00000511116 COQ6Q9Y2Z9 468 aa23.04■■□□□ 1.28
SMAD5-207ENST00000511116 NOBOXO60393 691 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 PIGNO95427 931 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 HTR1BP28222 390 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 UGT1A5P35504 534 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 MMP12P39900 470 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 NSFP46459 744 aaKnown RBP23.03■■□□□ 1.28
SMAD5-207ENST00000511116 ZNF143P52747 638 aaPredicted RBP23.03■■□□□ 1.28
SMAD5-207ENST00000511116 SRP54P61011 504 aaKnown RBP23.03■■□□□ 1.28
SMAD5-207ENST00000511116 POLR2FP61218 127 aaKnown RBP23.03■■□□□ 1.28
SMAD5-207ENST00000511116 INPP5AQ14642 412 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 CLEC16AQ2KHT3 1053 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 EFHC2Q5JST6 749 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 CDKAL1Q5VV42 579 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 FOXR1Q6PIV2 292 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 NYAP1Q6ZVC0 841 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 MON1BQ7L1V2 547 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 GKN2Q86XP6 184 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 COL26A1Q96A83 441 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 ZNF641Q96N77 438 aaPredicted RBP23.03■■□□□ 1.28
SMAD5-207ENST00000511116 GFM1Q96RP9 751 aaKnown RBP23.03■■□□□ 1.28
SMAD5-207ENST00000511116 LRRC19Q9H756 370 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 GULP1Q9UBP9 304 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 FZD10Q9ULW2 581 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 GPR34Q9UPC5 381 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 DOLKQ9UPQ8 538 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 SIK3Q9Y2K2 1263 aa23.03■■□□□ 1.28
SMAD5-207ENST00000511116 CFAP69A5D8W1 941 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 CCP110O43303 1012 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 CALB1P05937 261 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 CTSEP14091 401 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 SLC5A2P31639 672 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 CCL7P80098 99 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 MTM1Q13496 603 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 KCTD16Q68DU8 428 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 BRAT1Q6PJG6 821 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 OGFOD3Q6PK18 319 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 ENPP7Q6UWV6 458 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 RAB11FIP2Q7L804 512 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 ZSWIM9Q86XI8 627 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 ZNF354CQ86Y25 554 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 FBXO39Q8N4B4 442 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 EXOC2Q96KP1 924 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 TUBGCP5Q96RT8 1024 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 SELENOOQ9BVL4 669 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 CATSPERBQ9H7T0 1116 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 FAM207AQ9NSI2 230 aaPredicted RBP23.02■■□□□ 1.28
SMAD5-207ENST00000511116 APPL1Q9UKG1 709 aa23.02■■□□□ 1.28
SMAD5-207ENST00000511116 FGF10O15520 208 aaPredicted RBP23.01■■□□□ 1.27
SMAD5-207ENST00000511116 BUB1BO60566 1050 aaPredicted RBP23.01■■□□□ 1.27
SMAD5-207ENST00000511116 XPAP23025 273 aaPredicted RBP23.01■■□□□ 1.27
SMAD5-207ENST00000511116 HTR7P34969 479 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 CSNK1DP48730 415 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 LIG3P49916 1009 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 INHBCP55103 352 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 KRT31Q15323 416 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 PPP1R15BQ5SWA1 713 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 ATL2Q8NHH9 583 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 ENOX1Q8TC92 643 aaKnown RBP23.01■■□□□ 1.27
SMAD5-207ENST00000511116 WDR92Q96MX6 357 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 STRADBQ9C0K7 418 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 LRRN3Q9H3W5 708 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 NLRC4Q9NPP4 1024 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 SIRPGQ9P1W8 387 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 UBA2Q9UBT2 640 aaPredicted RBP23.01■■□□□ 1.27
SMAD5-207ENST00000511116 KLQ9UEF7 1012 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 ATP8A1Q9Y2Q0 1164 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 OR1A2Q9Y585 309 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 BSNQ9UPA5 3926 aa23.01■■□□□ 1.27
SMAD5-207ENST00000511116 ANKRD36A6QL64 1941 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 NVLO15381 856 aaKnown RBP23■■□□□ 1.27
SMAD5-207ENST00000511116 PRAMEF11O60813 436 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 RPLP0P05388 317 aaKnown RBP23■■□□□ 1.27
SMAD5-207ENST00000511116 PNLIPP16233 465 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 STAT1P42224 750 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 KIAA1024LP59773 190 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 ZFP36L1Q07352 338 aaKnown RBP23■■□□□ 1.27
SMAD5-207ENST00000511116 ZSCAN23Q3MJ62 389 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 ERAP2Q6P179 960 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 ECHDC3Q96DC8 303 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 PDXPQ96GD0 296 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 TMEM74Q96NL1 305 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 NCAPGQ9BPX3 1015 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 VPS16Q9H269 839 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 SYNDIG1Q9H7V2 258 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 EPB41L5Q9HCM4 733 aa23■■□□□ 1.27
SMAD5-207ENST00000511116 HECTD1Q9ULT8 2610 aa22.99■■□□□ 1.27
SMAD5-207ENST00000511116 CREB3O43889 395 aa22.99■■□□□ 1.27
SMAD5-207ENST00000511116 HOXC4P09017 264 aaPredicted RBP22.99■■□□□ 1.27
SMAD5-207ENST00000511116 NDST2P52849 883 aa22.99■■□□□ 1.27
SMAD5-207ENST00000511116 RPL7AP62424 266 aaKnown RBP22.99■■□□□ 1.27
SMAD5-207ENST00000511116 RALGDSQ12967 914 aa22.99■■□□□ 1.27
SMAD5-207ENST00000511116 CERCAMQ5T4B2 595 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms