RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 HEMGNQ9BXL5 484 aa14.08□□□□□ -0.16
DDX41-212ENST00000511040 CEP41Q9BYV8 373 aa14.08□□□□□ -0.16
DDX41-212ENST00000511040 SEPT10Q9P0V9 454 aa14.08□□□□□ -0.16
DDX41-212ENST00000511040 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.08□□□□□ -0.16
DDX41-212ENST00000511040 SPAARA0A1B0GVQ0 90 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 POM121BA6NF01 834 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 TM7SF2O76062 418 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 ZFXP17010 805 aaPredicted RBP14.07□□□□□ -0.16
DDX41-212ENST00000511040 MMP12P39900 470 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 LIG3P49916 1009 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 CCT8P50990 548 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 SUOXP51687 545 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 NIPAL4Q0D2K0 466 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 ELP6Q0PNE2 266 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 RALGDSQ12967 914 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 ZBTB17Q13105 803 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 SLC14A1Q13336 389 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 TFDP2Q14188 446 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 IHHQ14623 411 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 PDK1Q15118 436 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 PTPRRQ15256 657 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 SHBQ15464 509 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 TFDP3Q5H9I0 405 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 IQCHQ86VS3 1027 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 GATAD2AQ86YP4 633 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 NAXDQ8IW45 347 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 LRRC57Q8N9N7 239 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 EXD1Q8NHP7 514 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 BMFQ96LC9 184 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 OLFM3Q96PB7 478 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 ELF4Q99607 663 aaPredicted RBP14.07□□□□□ -0.16
DDX41-212ENST00000511040 KLF6Q99612 283 aaPredicted RBP14.07□□□□□ -0.16
DDX41-212ENST00000511040 GRPEL1Q9HAV7 217 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 BTBD3Q9Y2F9 522 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 PCDHB9Q9Y5E1 797 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 PCDHA3Q9Y5H8 950 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 RAI2Q9Y5P3 530 aa14.07□□□□□ -0.16
DDX41-212ENST00000511040 hCG_1818297A0A087WSY0 165 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 A0A1B0GTQ1 180 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 A6NNZ2 444 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 HTRA2O43464 458 aaPredicted RBP14.06□□□□□ -0.16
DDX41-212ENST00000511040 LZTS3O60299 673 aaPredicted RBP14.06□□□□□ -0.16
DDX41-212ENST00000511040 FTCDO95954 541 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 CPP00450 1065 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 ZNF883P0CG24 379 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 C6P13671 934 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 CTPS1P17812 591 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 CSRP1P21291 193 aaKnown RBP14.06□□□□□ -0.16
DDX41-212ENST00000511040 CTNNA1P35221 906 aaKnown RBP14.06□□□□□ -0.16
DDX41-212ENST00000511040 ZNF542PQ5EBM4 170 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 N4BP2L1Q5TBK1 243 aaPredicted RBP14.06□□□□□ -0.16
DDX41-212ENST00000511040 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 ABI3BPQ7Z7G0 1075 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 FATE1Q969F0 183 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 RBM41Q96IZ5 413 aaKnown RBP14.06□□□□□ -0.16
DDX41-212ENST00000511040 CALR3Q96L12 384 aaKnown RBP14.06□□□□□ -0.16
DDX41-212ENST00000511040 SMIM14Q96QK8 99 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 HERPUD2Q9BSE4 406 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 POLR1EQ9GZS1 481 aaKnown RBP14.06□□□□□ -0.16
DDX41-212ENST00000511040 SLC32A1Q9H598 525 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 MBNL1Q9NR56 388 aaKnown RBP14.06□□□□□ -0.16
DDX41-212ENST00000511040 B4GALT6Q9UBX8 382 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 PACSIN2Q9UNF0 486 aaPredicted RBP14.06□□□□□ -0.16
DDX41-212ENST00000511040 ADGRG1Q9Y653 693 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 DNAH14Q0VDD8 3507 aa14.06□□□□□ -0.16
DDX41-212ENST00000511040 LRRK1Q38SD2 2015 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 FPGTO14772 594 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 PPP1R12AO14974 1030 aaPredicted RBP14.05□□□□□ -0.16
DDX41-212ENST00000511040 MAGEC1O60732 1142 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 SDC3O75056 442 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 SOCS5O75159 536 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 PGLSO95336 258 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 PDHA1P08559 390 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 CTNNA2P26232 953 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 IGFALSP35858 605 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 POLR2LP62875 67 aaKnown RBP14.05□□□□□ -0.16
DDX41-212ENST00000511040 IFI35P80217 286 aaPredicted RBP14.05□□□□□ -0.16
DDX41-212ENST00000511040 OVGP1Q12889 678 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 IRF4Q15306 451 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 RALGPS1Q5JS13 557 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 TPRG1LQ5T0D9 272 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 ARMC12Q5T9G4 340 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 KYAT3Q6YP21 454 aaKnown RBP14.05□□□□□ -0.16
DDX41-212ENST00000511040 DPPA4Q7L190 304 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 PEX26Q7Z412 305 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 NT5DC3Q86UY8 548 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 ZC3H18Q86VM9 953 aaKnown RBP14.05□□□□□ -0.16
DDX41-212ENST00000511040 ZSCAN30Q86W11 494 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 SLC22A18ASQ8N1D0 253 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 TXLNBQ8N3L3 684 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 CNTD1Q8N815 330 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 TP53I13Q8NBR0 393 aaPredicted RBP14.05□□□□□ -0.16
DDX41-212ENST00000511040 ARRDC2Q8TBH0 407 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 ASB12Q8WXK4 309 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 ALG3Q92685 438 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 CENPTQ96BT3 561 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 AGAP3Q96P47 875 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 LENG8Q96PV6 779 aaPredicted RBP14.05□□□□□ -0.16
DDX41-212ENST00000511040 IL12RB2Q99665 862 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 C1QTNF7Q9BXJ2 289 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms