RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 SYT10Q6XYQ8 523 aa15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 SRLQ86TD4 932 aa15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 TBC1D3Q8IZP1 549 aaPredicted RBP15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 BBS5Q8N3I7 341 aa15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 CNTD1Q8N815 330 aa15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 C1orf54Q8WWF1 131 aa15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 GAREM1Q9H706 876 aa15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 DNPEPQ9ULA0 475 aa15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 CA5BQ9Y2D0 317 aa15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 ANKRD6Q9Y2G4 727 aa15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 FARP1Q9Y4F1 1045 aaPredicted RBP15.7■□□□□ 0.1
SH3TC1-220ENST00000511002 SPAARA0A1B0GVQ0 90 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 A0A1W2PR77 199 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 SLC7A4O43246 635 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 LATO43561 262 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 LIASO43766 372 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 SH3BP5O60239 455 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 NEBLO76041 1014 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 POP4O95707 220 aaKnown RBP15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 TOP3BO95985 862 aaKnown RBP15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 PRNPP04156 253 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 TCP1P17987 556 aaKnown RBP15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 CSNK1DP48730 415 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 SCNN1BP51168 640 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 DSC2Q02487 901 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 PRAMEF14Q5SWL7 426 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 TMIEQ8NEW7 156 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 HTR3CQ8WXA8 447 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 KLK6Q92876 244 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 AGAP3Q96P47 875 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 NUDCD1Q96RS6 583 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 ZDHHC5Q9C0B5 715 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 ATP8A1Q9Y2Q0 1164 aa15.69■□□□□ 0.1
SH3TC1-220ENST00000511002 TRPM6Q9BX84 2022 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 UPK3BL1B0FP48 263 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 UPK3BL2E5RIL1 263 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 H0Y8X5 98 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 PGRMC1O00264 195 aaKnown RBP15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 CES2O00748 559 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 KCNN4O15554 427 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 MTSS1O43312 755 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 UGT2B4P06133 528 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 PMLP29590 882 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 CASQ1P31415 396 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 CTSKP43235 329 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 AP1S1P61966 158 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 RACK1P63244 317 aaKnown RBP15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 IL9RQ01113 521 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 ITKQ08881 620 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 NSUN2Q08J23 767 aaKnown RBP eCLIP15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 NIPAL4Q0D2K0 466 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 SNX1Q13596 522 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 IHHQ14623 411 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 ALG1LQ6GMV1 187 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 PARS2Q7L3T8 475 aaKnown RBP15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 ZNF567Q8N184 647 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 SERAC1Q96JX3 654 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 CAPZA3Q96KX2 299 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 SEMA3CQ99985 751 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 POLR1EQ9GZS1 481 aaKnown RBP15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 CAAP1Q9H8G2 361 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 NOD2Q9HC29 1040 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 SCUBE2Q9NQ36 999 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 AASDHPPTQ9NRN7 309 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 AMACRQ9UHK6 382 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 TTC7AQ9ULT0 858 aaPredicted RBP15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 ZFR2Q9UPR6 939 aaKnown RBP15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 SAR1BQ9Y6B6 198 aa15.68■□□□□ 0.1
SH3TC1-220ENST00000511002 F5H423 210 aaPredicted RBP15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 RNGTTO60942 597 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 CEACAM1P13688 526 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 PRLRP16471 622 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 CD68P34810 354 aaPredicted RBP15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 ABL2P42684 1182 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 RAD51Q06609 339 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 TEAD4Q15561 434 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 OASLQ15646 514 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 TEX44Q53QW1 395 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 GDPD4Q6W3E5 623 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 ERN2Q76MJ5 926 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 TRIM69Q86WT6 500 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 CAMK1DQ8IU85 385 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 PRELID2Q8N945 189 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 ARRDC2Q8TBH0 407 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 ACTRT1Q8TDG2 376 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 MAIP1Q8WWC4 291 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 LRIG1Q96JA1 1093 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 TEKT5Q96M29 485 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 KLHL32Q96NJ5 620 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 MYOCQ99972 504 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 TMEM121Q9BTD3 319 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 AP1M1Q9BXS5 423 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 FRMD8P1Q9BZ68 369 aaPredicted RBP15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 CPEB1Q9BZB8 566 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 KDM4CQ9H3R0 1056 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 USP29Q9HBJ7 922 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 FZD3Q9NPG1 666 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 TM7SF3Q9NS93 570 aa15.67■□□□□ 0.1
SH3TC1-220ENST00000511002 KLHL8Q9P2G9 620 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms