RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 MED4Q9NPJ6 270 aa16.85■□□□□ 0.29
SCAMP1-203ENST00000510030 NSMCE4AQ9NXX6 385 aa16.85■□□□□ 0.29
SCAMP1-203ENST00000510030 IL36AQ9UHA7 158 aa16.85■□□□□ 0.29
SCAMP1-203ENST00000510030 PHTF1Q9UMS5 762 aa16.85■□□□□ 0.29
SCAMP1-203ENST00000510030 TCAF1Q9Y4C2 921 aa16.85■□□□□ 0.29
SCAMP1-203ENST00000510030 PCDHB9Q9Y5E1 797 aa16.85■□□□□ 0.29
SCAMP1-203ENST00000510030 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.85■□□□□ 0.29
SCAMP1-203ENST00000510030 IKBKGQ9Y6K9 419 aa16.85■□□□□ 0.29
SCAMP1-203ENST00000510030 RPS6KL1Q9Y6S9 549 aa16.85■□□□□ 0.29
SCAMP1-203ENST00000510030 NCOR1O75376 2440 aa16.85■□□□□ 0.29
SCAMP1-203ENST00000510030 EXOC1LA0A1B0GW35 172 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 C2orf81A6NN90 581 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 ATP5DP30049 168 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 PLA2G5P39877 138 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 GALK1P51570 392 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 CCDC15Q0P6D6 951 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 TRAF2Q12933 501 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 ZNF234Q14588 700 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 CRYMQ14894 314 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 PKN3Q6P5Z2 889 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 GDPD4Q6W3E5 623 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 USP45Q70EL2 814 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 RNF135Q8IUD6 432 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 LMNTD2Q8IXW0 634 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 SLC25A41Q8N5S1 370 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 TMIEQ8NEW7 156 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 LPCAT1Q8NF37 534 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 ST13P5Q8NFI4 369 aaPredicted RBP16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 ECHDC3Q96DC8 303 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 CFAP36Q96G28 342 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 TMEM245Q9H330 911 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 MAGEE1Q9HCI5 957 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 ZNF446Q9NWS9 450 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 DKK3Q9UBP4 350 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 SLC24A2Q9UI40 661 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 CHKBQ9Y259 395 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 PCDHGC4Q9Y5F7 938 aa16.84■□□□□ 0.29
SCAMP1-203ENST00000510030 TTC34A8MYJ7 566 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 C1QTNF3-AMACRE9PGA6 284 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 TRAFD1O14545 582 aaPredicted RBP16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 BNIP3LO60238 219 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 RNASEH1O60930 286 aaKnown RBP16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 CDH16O75309 829 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 ALDH1A2O94788 518 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 MYZAPP0CAP1 466 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 ENPP2Q13822 863 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 STARD3Q14849 445 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 POU6F1Q14863 301 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 RASA2Q15283 850 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 TAF1AQ15573 450 aaPredicted RBP16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 SKIDA1Q1XH10 827 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 TMEM196Q5HYL7 178 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 CERCAMQ5T4B2 595 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 FAM46CQ5VWP2 391 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 PDPK2PQ6A1A2 396 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 UNC5AQ6ZN44 842 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 TAOK1Q7L7X3 1001 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 KDELC2Q7Z4H8 507 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 ZNF513Q8N8E2 541 aaPredicted RBP16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 SORCS1Q8WY21 1168 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 CHFRQ96EP1 664 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 ZIM3Q96PE6 472 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 EPB41L4BQ9H329 900 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.83■□□□□ 0.285e-9■■■□□ 15.9
SCAMP1-203ENST00000510030 DUSP12Q9UNI6 340 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 SORCS3Q9UPU3 1222 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 MRPS17Q9Y2R5 130 aaKnown RBP16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 FAM169AQ9Y6X4 670 aa16.83■□□□□ 0.28
SCAMP1-203ENST00000510030 TCRBV9S1A1TA0A576 114 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 TSPAN11A1L157 253 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 BANF1O75531 89 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 SSTR1P30872 391 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 HADHAP40939 763 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 CHRNA4P43681 627 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 MRPS21P82921 87 aaKnown RBP16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 PRKCQQ04759 706 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 ZP2Q05996 745 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 SEPT6Q14141 434 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 GALNT3Q14435 633 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 LONRF1Q17RB8 773 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 ANKRD20A4Q4UJ75 823 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 HP1BP3Q5SSJ5 553 aaPredicted RBP16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 LGSNQ5TDP6 509 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 KIAA0930Q6ICG6 404 aaPredicted RBP16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 GLT6D1Q7Z4J2 308 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 CAMK1DQ8IU85 385 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 CHPFQ8IZ52 775 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 CALML6Q8TD86 181 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 BLOC1S5Q8TDH9 187 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 PTPRN2Q92932 1015 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 ZNF669Q96BR6 464 aaPredicted RBP16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 FAM122AQ96E09 287 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 SHDQ96IW2 340 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 LYSMD1Q96S90 227 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 DYRK4Q9NR20 520 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 HEBP1Q9NRV9 189 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 TXNDC16Q9P2K2 825 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 PPIL1Q9Y3C6 166 aa16.82■□□□□ 0.28
SCAMP1-203ENST00000510030 A0A0J9YYE9 177 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms