RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 LIG3P49916 1009 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 PEX5P50542 639 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 NAP1L1P55209 391 aaKnown RBP13.66□□□□□ -0.22
SNF8-206ENST00000509989 PPIDQ08752 370 aaKnown RBP13.66□□□□□ -0.22
SNF8-206ENST00000509989 ITKQ08881 620 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 STAT4Q14765 748 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 DBX2Q6ZNG2 339 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 Q6ZSR6 202 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 KANSL1Q7Z3B3 1105 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 ABI3BPQ7Z7G0 1075 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 NT5DC3Q86UY8 548 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 NAXDQ8IW45 347 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 CCDC13Q8IYE1 715 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 KATNAL2Q8IYT4 538 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 TP53I13Q8NBR0 393 aaPredicted RBP13.66□□□□□ -0.22
SNF8-206ENST00000509989 PLA2G15Q8NCC3 412 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 CCNYQ8ND76 341 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 RAB7BQ96AH8 199 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 CENPTQ96BT3 561 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 HDAC11Q96DB2 347 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 KLHDC7BQ96G42 594 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 ZNF641Q96N77 438 aaPredicted RBP13.66□□□□□ -0.22
SNF8-206ENST00000509989 ZDHHC5Q9C0B5 715 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 ATP13A3Q9H7F0 1226 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 DDX56Q9NY93 547 aaKnown RBP13.66□□□□□ -0.22
SNF8-206ENST00000509989 KLF15Q9UIH9 416 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 ATP8A1Q9Y2Q0 1164 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 TTLL3Q9Y4R7 772 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 ADGRG1Q9Y653 693 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 PLXNB3Q9ULL4 1909 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 SCN8AQ9UQD0 1980 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 AKAP13Q12802 2813 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 MYLKQ15746 1914 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 ZNF487B1APH4 448 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 F5H423 210 aaPredicted RBP13.65□□□□□ -0.22
SNF8-206ENST00000509989 CER1O95813 267 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 PRLP01236 227 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 C6P13671 934 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 SPINK2P20155 84 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 LHCGRP22888 699 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 CTNNA1P35221 906 aaKnown RBP13.65□□□□□ -0.22
SNF8-206ENST00000509989 RENBPP51606 427 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 AP1S1P61966 158 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 CCZ1BP86790 482 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 CCZ1P86791 482 aaPredicted RBP13.65□□□□□ -0.22
SNF8-206ENST00000509989 AP1B1Q10567 949 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 ZNF211Q13398 564 aaPredicted RBP13.65□□□□□ -0.22
SNF8-206ENST00000509989 HNRNPDQ14103 355 aaKnown RBP13.65□□□□□ -0.22
SNF8-206ENST00000509989 IRF4Q15306 451 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 WSCD2Q2TBF2 565 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 LIPIQ6XZB0 460 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 TSPAN33Q86UF1 283 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.65□□□□□ -0.22
SNF8-206ENST00000509989 PIH1D2Q8WWB5 315 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 ELF4Q99607 663 aaPredicted RBP13.65□□□□□ -0.22
SNF8-206ENST00000509989 IL12RB2Q99665 862 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 TCEAL2Q9H3H9 227 aaPredicted RBP13.65□□□□□ -0.22
SNF8-206ENST00000509989 GPR27Q9NS67 375 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 UCKL1Q9NWZ5 548 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 SEPT10Q9P0V9 454 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 B4GALT6Q9UBX8 382 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 PCOLCE2Q9UKZ9 415 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 PCDHB9Q9Y5E1 797 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 PCDHA3Q9Y5H8 950 aa13.65□□□□□ -0.22
SNF8-206ENST00000509989 NPIPB15A6NHN6 443 aaPredicted RBP13.64□□□□□ -0.23
SNF8-206ENST00000509989 SCAMP1O15126 338 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 DDX3YO15523 660 aaKnown RBP13.64□□□□□ -0.23
SNF8-206ENST00000509989 FZD6O60353 706 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 TM7SF2O76062 418 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 PGLSO95336 258 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 PYGMP11217 842 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 CSRP1P21291 193 aaKnown RBP13.64□□□□□ -0.23
SNF8-206ENST00000509989 XPAP23025 273 aaPredicted RBP13.64□□□□□ -0.23
SNF8-206ENST00000509989 CTNNA2P26232 953 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 AKT2P31751 481 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 SKOR1P84550 965 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 CCDC15Q0P6D6 951 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 FZD2Q14332 565 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 ALG1LQ6GMV1 187 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 DPPA4Q7L190 304 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 PTAR1Q7Z6K3 402 aaPredicted RBP13.64□□□□□ -0.23
SNF8-206ENST00000509989 ZC3H18Q86VM9 953 aaKnown RBP13.64□□□□□ -0.23
SNF8-206ENST00000509989 VSIG1Q86XK7 387 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 CCDC50Q8IVM0 306 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 PNPLA1Q8N8W4 532 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 BAHD1Q8TBE0 780 aaPredicted RBP13.64□□□□□ -0.23
SNF8-206ENST00000509989 HCAR2Q8TDS4 363 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 CXorf40AQ8TE69 158 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 SAP25Q8TEE9 199 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 SETD7Q8WTS6 366 aaKnown RBP13.64□□□□□ -0.23
SNF8-206ENST00000509989 MAK16Q9BXY0 300 aaKnown RBP13.64□□□□□ -0.23
SNF8-206ENST00000509989 GRPEL1Q9HAV7 217 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 CHKBQ9Y259 395 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 RAI2Q9Y5P3 530 aa13.64□□□□□ -0.23
SNF8-206ENST00000509989 GOLGA4Q13439 2230 aaKnown RBP13.63□□□□□ -0.23
SNF8-206ENST00000509989 TCRBV7S2A1N4TA0A589 114 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 K7ESM1 405 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 ZRANB2O95218 330 aaKnown RBP eCLIP13.63□□□□□ -0.23
SNF8-206ENST00000509989 CPP00450 1065 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 ZNF883P0CG24 379 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms