RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 GPATCH11Q8N954 259 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 ZNF557Q8N988 423 aaPredicted RBP7.9□□□□□ -1.14
SSBP2-213ENST00000509743 TDRD5Q8NAT2 981 aaKnown RBP7.9□□□□□ -1.14
SSBP2-213ENST00000509743 OR6P1Q8NGX9 317 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 TTC8Q8TAM2 541 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 FAM45AQ8TCE6 357 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 BLOC1S5Q8TDH9 187 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 HDAC10Q969S8 669 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 ACDQ96AP0 544 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 RMDN1Q96DB5 314 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 ERP27Q96DN0 273 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 THOC1Q96FV9 657 aaKnown RBP7.9□□□□□ -1.14
SSBP2-213ENST00000509743 CYP2S1Q96SQ9 504 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 TCF12Q99081 682 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 C1QTNF1Q9BXJ1 281 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 TMEM120AQ9BXJ8 343 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 MYLK2Q9H1R3 596 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 TASP1Q9H6P5 420 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 TLR9Q9NR96 1032 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 NLE1Q9NVX2 485 aaPredicted RBP7.9□□□□□ -1.14
SSBP2-213ENST00000509743 DNMT3BQ9UBC3 853 aaKnown RBP7.9□□□□□ -1.14
SSBP2-213ENST00000509743 DPP7Q9UHL4 492 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 RPL26L1Q9UNX3 145 aaKnown RBP7.9□□□□□ -1.14
SSBP2-213ENST00000509743 VPS9D1Q9Y2B5 631 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 OR51B4Q9Y5P0 310 aa7.9□□□□□ -1.14
SSBP2-213ENST00000509743 VWA8A3KMH1 1905 aa7.9□□□□□ -1.15
SSBP2-213ENST00000509743 MYO16Q9Y6X6 1858 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 A0A1W2PRU2 124 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 TTC24A2A3L6 582 aaPredicted RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 C5orf67F2Z3F1 127 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 G3V2L1 256 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 LEFTY2O00292 366 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CD3EAPO15446 510 aaKnown RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CCL16O15467 120 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 PHGDHO43175 533 aaKnown RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 SNAP91O60641 907 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CCDC22O60826 627 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 XYLBO75191 536 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 HAUS5O94927 633 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 KLHL2O95198 593 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CD160O95971 181 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 S1PR4O95977 384 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 RB1P06400 928 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 RBP1P09455 135 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 PTPN2P17706 415 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 MZF1P28698 734 aaPredicted RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 AVPR1AP37288 418 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CSKP41240 450 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 RGRP47804 291 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 ARSDP51689 593 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CLCN4P51793 760 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 ZNF140P52738 457 aaPredicted RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 ABCE1P61221 599 aaKnown RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 RHOAP61586 193 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 IRF9Q00978 393 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 ZBTB16Q05516 673 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 GALNT3Q14435 633 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 TBCCQ15814 346 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 TYSND1Q2T9J0 566 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 AGAP9Q5VTM2 703 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 PLPP4Q5VZY2 271 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 PDE12Q6L8Q7 609 aaKnown RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 LRRC8EQ6NSJ5 796 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 KLC3Q6P597 504 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 NCEH1Q6PIU2 408 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CNSTQ6PJW8 725 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 ZCCHC23Q6ZST2 131 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 PTAR1Q7Z6K3 402 aaPredicted RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CLNKQ7Z7G1 428 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 ARID3BQ8IVW6 561 aaPredicted RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 PLD6Q8N2A8 252 aaKnown RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 ACVR1CQ8NER5 493 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 OR6Y1Q8NGX8 325 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 OR4L1Q8NH43 312 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 FIBINQ8TAL6 211 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 PIWIL2Q8TC59 973 aaKnown RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 SPPL3Q8TCT6 385 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 DDI1Q8WTU0 396 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 KCTD4Q8WVF5 259 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 INPP5DQ92835 1189 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 SKA1Q96BD8 255 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 KLHL29Q96CT2 875 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CCDC126Q96EE4 140 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 ALG14Q96F25 216 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 SCYL1Q96KG9 808 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 OMDQ99983 421 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 C19orf43Q9BQ61 176 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 MRPL57Q9BQC6 102 aaKnown RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CORO1BQ9BR76 489 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 LRMDAQ9H2I8 198 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 MRPL46Q9H2W6 279 aaKnown RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 KCNK13Q9HB14 408 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 POPDC3Q9HBV1 291 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 FBXO6Q9NRD1 293 aaPredicted RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CATSPERZQ9NTU4 200 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 INTS10Q9NVR2 710 aaKnown RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 OXSMQ9NWU1 459 aa7.89□□□□□ -1.15
SSBP2-213ENST00000509743 CXXC1Q9P0U4 656 aaPredicted RBP7.89□□□□□ -1.15
SSBP2-213ENST00000509743 KIAA1522Q9P206 1035 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms