RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RHOAP61586 193 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 UGP2Q16851 508 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 CLEC16AQ2KHT3 1053 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 SLFN11Q7Z7L1 901 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 DNAAF5Q86Y56 855 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 PHF13Q86YI8 300 aaPredicted RBP16.05■□□□□ 0.16
RAB40C-202ENST00000509637 UMODL1-AS1Q8N2C9 162 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 GPR156Q8NFN8 814 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 NAT6Q93015 286 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 COL26A1Q96A83 441 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 LIN37Q96GY3 246 aaPredicted RBP16.05■□□□□ 0.16
RAB40C-202ENST00000509637 SUV39H2Q9H5I1 410 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 SYNDIG1Q9H7V2 258 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 EVA1BQ9NVM1 165 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 NCKIPSDQ9NZQ3 722 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 ADAM22Q9P0K1 906 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 HPCAL4Q9UM19 191 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 D6RAR5 112 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 PLD2O14939 933 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 CREB3O43889 395 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 IGSF6O95976 241 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 ITGA2BP08514 1039 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 ITIH1P19827 911 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 LIG3P49916 1009 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 PEX5P50542 639 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 GEMIN4P57678 1058 aaKnown RBP16.04■□□□□ 0.16
RAB40C-202ENST00000509637 SRP54P61011 504 aaKnown RBP16.04■□□□□ 0.16
RAB40C-202ENST00000509637 SPIDRQ14159 915 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 NFATC4Q14934 902 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 LRRC14Q15048 493 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 ZSCAN23Q3MJ62 389 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 SCYL2Q6P3W7 929 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 OGFOD3Q6PK18 319 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 ARHGAP36Q6ZRI8 547 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 ARL10Q8N8L6 244 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 PTCD2Q8WV60 388 aaKnown RBP16.04■□□□□ 0.16
RAB40C-202ENST00000509637 CELF6Q96J87 481 aaKnown RBP16.04■□□□□ 0.16
RAB40C-202ENST00000509637 LGR4Q9BXB1 951 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 SLC39A8Q9C0K1 460 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 EPB41L5Q9HCM4 733 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 FGF22Q9HCT0 170 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 TAS2R14Q9NYV8 317 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 GPR34Q9UPC5 381 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 DAAM1Q9Y4D1 1078 aa16.04■□□□□ 0.16
RAB40C-202ENST00000509637 MYO18BQ8IUG5 2567 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 TTC24A2A3L6 582 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-202ENST00000509637 PCCBP05166 539 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 RPLP0P05388 317 aaKnown RBP16.03■□□□□ 0.16
RAB40C-202ENST00000509637 MMP12P39900 470 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 RPIAP49247 311 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 YBEYP58557 167 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-202ENST00000509637 ZFP36L1Q07352 338 aaKnown RBP16.03■□□□□ 0.16
RAB40C-202ENST00000509637 AGERQ15109 404 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 PTPRRQ15256 657 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 CYP4V2Q6ZWL3 525 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-202ENST00000509637 RAB11FIP2Q7L804 512 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 ZNF354CQ86Y25 554 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 ARHGAP12Q8IWW6 846 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 FBXO39Q8N4B4 442 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 TSEN2Q8NCE0 465 aaKnown RBP16.03■□□□□ 0.16
RAB40C-202ENST00000509637 MSANTD4Q8NCY6 345 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 C3orf20Q8ND61 904 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 ARHGEF26Q96DR7 871 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 MED8Q96G25 268 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 PEBP4Q96S96 227 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 RBM15Q96T37 977 aaKnown RBP eCLIP16.03■□□□□ 0.161e-6■■■■■ 29.9
RAB40C-202ENST00000509637 LRRN3Q9H3W5 708 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 ST14Q9Y5Y6 855 aa16.03■□□□□ 0.16
RAB40C-202ENST00000509637 ZSCAN5CA6NGD5 496 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-202ENST00000509637 B4GAT1O43505 415 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 PRAMEF11O60813 436 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 RASGRP1O95267 797 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 ITGB6P18564 788 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 EEF1GP26641 437 aaKnown RBP16.02■□□□□ 0.16
RAB40C-202ENST00000509637 ARSDP51689 593 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 ZNF143P52747 638 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-202ENST00000509637 NFKB2Q00653 900 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 ESRP1Q6NXG1 681 aaKnown RBP16.02■□□□□ 0.16
RAB40C-202ENST00000509637 LVRNQ6Q4G3 990 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 LIPIQ6XZB0 460 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 CCDC81Q6ZN84 652 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 APTXQ7Z2E3 356 aaKnown RBP16.02■□□□□ 0.16
RAB40C-202ENST00000509637 FSTL5Q8N475 847 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-202ENST00000509637 ARL14Q8N4G2 192 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 Q8N9G6 341 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-202ENST00000509637 ENOX1Q8TC92 643 aaKnown RBP16.02■□□□□ 0.16
RAB40C-202ENST00000509637 CASKIN2Q8WXE0 1202 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 CCNL2Q96S94 520 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-202ENST00000509637 SYT11Q9BT88 431 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 SELENOOQ9BVL4 669 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 TRIM7Q9C029 511 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 TMEM168Q9H0V1 697 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 HSD3B7Q9H2F3 369 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 FANCLQ9NW38 375 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 RNF215Q9Y6U7 377 aa16.02■□□□□ 0.16
RAB40C-202ENST00000509637 A8MX80 341 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 TOR1BO14657 336 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 RECQL5O94762 991 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-202ENST00000509637 CTSEP14091 401 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 CCKBRP32239 447 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms