RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 GPR156Q8NFN8 814 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 TPCN2Q8NHX9 752 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 CXorf40AQ8TE69 158 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 NAT6Q93015 286 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 MED8Q96G25 268 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 APOOQ9BUR5 198 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 LGR4Q9BXB1 951 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 CPEB1Q9BZB8 566 aaKnown RBP13.49□□□□□ -0.25
DDX41-210ENST00000509576 SLC13A1Q9BZW2 595 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 VPS16Q9H269 839 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 LRRC19Q9H756 370 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 SYNDIG1Q9H7V2 258 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 FGF22Q9HCT0 170 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 FAM207AQ9NSI2 230 aaPredicted RBP13.49□□□□□ -0.25
DDX41-210ENST00000509576 NCKIPSDQ9NZQ3 722 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 FZD10Q9ULW2 581 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 ST14Q9Y5Y6 855 aa13.49□□□□□ -0.25
DDX41-210ENST00000509576 SPTA1P02549 2419 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 WASH4PA8MWX3 477 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
DDX41-210ENST00000509576 PLD2O14939 933 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 IGSF6O95976 241 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 RPLP0P05388 317 aaKnown RBP13.48□□□□□ -0.25
DDX41-210ENST00000509576 ITGB6P18564 788 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 GPD1P21695 349 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 ERCC5P28715 1186 aaPredicted RBP13.48□□□□□ -0.25
DDX41-210ENST00000509576 EPHB2P29323 1055 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 ETFBP38117 255 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 LIG3P49916 1009 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 RHOAP61586 193 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 PTK2BQ14289 1009 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 NFATC4Q14934 902 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 LRRC14Q15048 493 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 AGERQ15109 404 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 KRT31Q15323 416 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 UGP2Q16851 508 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 CLEC16AQ2KHT3 1053 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 INO80DQ53TQ3 878 aaPredicted RBP13.48□□□□□ -0.25
DDX41-210ENST00000509576 ENPP7Q6UWV6 458 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 RD3Q7Z3Z2 195 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 ZNF677Q86XU0 584 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 PHF13Q86YI8 300 aaPredicted RBP13.48□□□□□ -0.25
DDX41-210ENST00000509576 ARHGAP12Q8IWW6 846 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 UMODL1-AS1Q8N2C9 162 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 PMEPA1Q969W9 287 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 GRAMD1AQ96CP6 724 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 PEBP4Q96S96 227 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 RBM15Q96T37 977 aaKnown RBP eCLIP13.48□□□□□ -0.253e-7■□□□□ 10.7
DDX41-210ENST00000509576 RETREG1Q9H6L5 497 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 EPB41L5Q9HCM4 733 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 FOXJ2Q9P0K8 574 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 FLNCQ14315 2725 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 DOPEY2Q9Y3R5 2298 aa13.48□□□□□ -0.25
DDX41-210ENST00000509576 PES1O00541 588 aaKnown RBP13.47□□□□□ -0.25
DDX41-210ENST00000509576 CREB3O43889 395 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 PCCBP05166 539 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 KRT3P12035 628 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 GEMIN4P57678 1058 aaKnown RBP13.47□□□□□ -0.25
DDX41-210ENST00000509576 SRP54P61011 504 aaKnown RBP13.47□□□□□ -0.25
DDX41-210ENST00000509576 ZFP36L1Q07352 338 aaKnown RBP13.47□□□□□ -0.25
DDX41-210ENST00000509576 PTPRRQ15256 657 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 OGFOD3Q6PK18 319 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 CCDC81Q6ZN84 652 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 RAB11FIP2Q7L804 512 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 APTXQ7Z2E3 356 aaKnown RBP13.47□□□□□ -0.25
DDX41-210ENST00000509576 SLFN11Q7Z7L1 901 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 VASH2Q86V25 355 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 FAM114A1Q8IWE2 563 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 NPWQ8N729 165 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 TSEN2Q8NCE0 465 aaKnown RBP13.47□□□□□ -0.25
DDX41-210ENST00000509576 C3orf20Q8ND61 904 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 HTR3CQ8WXA8 447 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 ARHGEF26Q96DR7 871 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 CELF6Q96J87 481 aaKnown RBP13.47□□□□□ -0.25
DDX41-210ENST00000509576 CCNL2Q96S94 520 aaPredicted RBP13.47□□□□□ -0.25
DDX41-210ENST00000509576 SYT11Q9BT88 431 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 TRIM4Q9C037 500 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 SLC39A8Q9C0K1 460 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 HSD3B7Q9H2F3 369 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 LRRN3Q9H3W5 708 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 SUV39H2Q9H5I1 410 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 EVA1BQ9NVM1 165 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 TMEM51Q9NW97 253 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 TAS2R14Q9NYV8 317 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 ADAM22Q9P0K1 906 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 ACSL6Q9UKU0 697 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 GPR34Q9UPC5 381 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 PCDHGA7Q9Y5G6 932 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 RNF215Q9Y6U7 377 aa13.47□□□□□ -0.25
DDX41-210ENST00000509576 PRAMEF33A0A0G2JMD5 474 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 TTC24A2A3L6 582 aaPredicted RBP13.46□□□□□ -0.25
DDX41-210ENST00000509576 ZSCAN5CA6NGD5 496 aaPredicted RBP13.46□□□□□ -0.25
DDX41-210ENST00000509576 SIGLEC16A6NMB1 481 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 C9orf172C9J069 976 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 PRAMEF10O60809 474 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 CCKBRP32239 447 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 RPIAP49247 311 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 PEX5P50542 639 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 INHBCP55103 352 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms