RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 PCDHB1Q9Y5F3 818 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 SCINQ9Y6U3 715 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 ANKRD36A6QL64 1941 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 DFFAO00273 331 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 TCEA3O75764 348 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 DXOO77932 396 aaKnown RBP12.73□□□□□ -0.37
KDM3B-206ENST00000509468 SERPINC1P01008 464 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 C6P13671 934 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 TSHRP16473 764 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 ERCC2P18074 760 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 TGM2P21980 687 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 MIPP30301 263 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 HK3P52790 923 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 BCL2L1Q07817 233 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 C1orf61Q13536 156 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 INPP5AQ14642 412 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 NR1I3Q14994 352 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 IRF4Q15306 451 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 CA9Q16790 459 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 ISXQ2M1V0 245 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 AFMIDQ63HM1 303 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 GUSBP11Q6P575 273 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 ENPP7Q6UWV6 458 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 ZNF571Q7Z3V5 609 aaPredicted RBP12.73□□□□□ -0.37
KDM3B-206ENST00000509468 GKN2Q86XP6 184 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 CAMK1DQ8IU85 385 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 TSEN2Q8NCE0 465 aaKnown RBP12.73□□□□□ -0.37
KDM3B-206ENST00000509468 ZNF599Q96NL3 588 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 NAP1L5Q96NT1 182 aaPredicted RBP12.73□□□□□ -0.37
KDM3B-206ENST00000509468 UBL7Q96S82 380 aaPredicted RBP12.73□□□□□ -0.37
KDM3B-206ENST00000509468 SNRNP25Q9BV90 132 aaKnown RBP12.73□□□□□ -0.37
KDM3B-206ENST00000509468 CINPQ9BW66 212 aaPredicted RBP12.73□□□□□ -0.37
KDM3B-206ENST00000509468 ISCUQ9H1K1 167 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 PRORYQ9H606 182 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 ZWILCHQ9H900 591 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 TMEM63CQ9P1W3 806 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 PADI4Q9UM07 663 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 ATP8A1Q9Y2Q0 1164 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 BZW2Q9Y6E2 419 aaKnown RBP12.73□□□□□ -0.37
KDM3B-206ENST00000509468 CACNA1GO43497 2377 aa12.73□□□□□ -0.37
KDM3B-206ENST00000509468 A0A1B0GTH6 734 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-206ENST00000509468 A0A1W2PQ67 120 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 H3BRJ5 948 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 DDX3XO00571 662 aaKnown RBP eCLIP12.72□□□□□ -0.37
KDM3B-206ENST00000509468 MUSKO15146 869 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 RASGRP1O95267 797 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 TNFP01375 233 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 MPOP05164 745 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 RBMS1P29558 406 aaKnown RBP12.72□□□□□ -0.37
KDM3B-206ENST00000509468 PCK1P35558 622 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 SCNN1BP51168 640 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 PCBP4P57723 403 aaKnown RBP12.72□□□□□ -0.37
KDM3B-206ENST00000509468 TPM4P67936 248 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 GABREP78334 506 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 MTM1Q13496 603 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 PIGHQ14442 188 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-206ENST00000509468 NFATC4Q14934 902 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 FIGNQ5HY92 759 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 RBM44Q6ZP01 1051 aaKnown RBP12.72□□□□□ -0.37
KDM3B-206ENST00000509468 HID1Q8IV36 788 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 RBFAQ8N0V3 343 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 OR6C4Q8NGE1 309 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 PEBP4Q96S96 227 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 KCTD15Q96SI1 283 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-206ENST00000509468 LRRC61Q9BV99 259 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 CLPBQ9H078 707 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 TCEAL2Q9H3H9 227 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-206ENST00000509468 KCTD5Q9NXV2 234 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 CWC15Q9P013 229 aaKnown RBP12.72□□□□□ -0.37
KDM3B-206ENST00000509468 MYO1AQ9UBC5 1043 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 SEPT3Q9UH03 358 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 COQ6Q9Y2Z9 468 aa12.72□□□□□ -0.37
KDM3B-206ENST00000509468 TMX2-CTNND1H3BSU7 103 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 TK2O00142 265 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 PDE2AO00408 941 aaPredicted RBP12.71□□□□□ -0.37
KDM3B-206ENST00000509468 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
KDM3B-206ENST00000509468 LRCH4O75427 683 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 HOXC4P09017 264 aaPredicted RBP12.71□□□□□ -0.37
KDM3B-206ENST00000509468 SKILP12757 684 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 KELP23276 732 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 NFKBIAP25963 317 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 HSPA9P38646 679 aaKnown RBP12.71□□□□□ -0.37
KDM3B-206ENST00000509468 MMP12P39900 470 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 ARL4AP40617 200 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 SRP54P61011 504 aaKnown RBP12.71□□□□□ -0.37
KDM3B-206ENST00000509468 AP1S1P61966 158 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 LBRQ14739 615 aaKnown RBP12.71□□□□□ -0.37
KDM3B-206ENST00000509468 BROXQ5VW32 411 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 IGF2-ASQ6U949 168 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 GPR155Q7Z3F1 870 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 RD3Q7Z3Z2 195 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 ARHGAP12Q8IWW6 846 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 SLC35F3Q8IY50 421 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 BBS5Q8N3I7 341 aa12.71□□□□□ -0.37
KDM3B-206ENST00000509468 LSM14AQ8ND56 463 aaKnown RBP12.71□□□□□ -0.37
KDM3B-206ENST00000509468 SYN2Q92777 582 aaPredicted RBP12.71□□□□□ -0.37
KDM3B-206ENST00000509468 TSACCQ96A04 125 aaPredicted RBP12.71□□□□□ -0.37
KDM3B-206ENST00000509468 ZNF653Q96CK0 615 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms