RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 C6orf132Q5T0Z8 1188 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 FOXR1Q6PIV2 292 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 RBM44Q6ZP01 1051 aaKnown RBP15.51■□□□□ 0.07
TPM3-219ENST00000509409 RFX8Q6ZV50 586 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 ZNF571Q7Z3V5 609 aaPredicted RBP15.51■□□□□ 0.07
TPM3-219ENST00000509409 FSTL5Q8N475 847 aaPredicted RBP15.51■□□□□ 0.07
TPM3-219ENST00000509409 TSEN2Q8NCE0 465 aaKnown RBP15.51■□□□□ 0.07
TPM3-219ENST00000509409 ZNF248Q8NDW4 579 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 ATL2Q8NHH9 583 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 TBATAQ96M53 351 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 FCRL3Q96P31 734 aaPredicted RBP15.51■□□□□ 0.07
TPM3-219ENST00000509409 TUBGCP5Q96RT8 1024 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 EIF3CQ99613 913 aaKnown RBP15.51■□□□□ 0.07
TPM3-219ENST00000509409 SYT11Q9BT88 431 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 APOOQ9BUR5 198 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 LRRC61Q9BV99 259 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 BOCQ9BWV1 1114 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 CLPBQ9H078 707 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 PDFQ9HBH1 243 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 SIRPGQ9P1W8 387 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 MYO1AQ9UBC5 1043 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 PNMA8BQ9ULN7 279 aaPredicted RBP15.51■□□□□ 0.07
TPM3-219ENST00000509409 PADI4Q9UM07 663 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 RASGRP1O95267 797 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 TNFP01375 233 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 ALPIP09923 528 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 GZMAP12544 262 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 RBMS1P29558 406 aaKnown RBP15.5■□□□□ 0.07
TPM3-219ENST00000509409 CSNK1DP48730 415 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 SCNN1BP51168 640 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 HK3P52790 923 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 PCBP4P57723 403 aaKnown RBP15.5■□□□□ 0.07
TPM3-219ENST00000509409 C3orf38Q5JPI3 329 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 PERM1Q5SV97 790 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 BROXQ5VW32 411 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 SPACA3Q8IXA5 215 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 SLC35F3Q8IY50 421 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 ARFGAP1Q8N6T3 406 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 NAT6Q93015 286 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 ZNF653Q96CK0 615 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 PEBP4Q96S96 227 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 BPIFA3Q9BQP9 254 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 EDEM3Q9BZQ6 932 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 TRIM7Q9C029 511 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 AIPL1Q9NZN9 384 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 ATP8A1Q9Y2Q0 1164 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 OR1A2Q9Y585 309 aa15.5■□□□□ 0.07
TPM3-219ENST00000509409 TSPAN11A1L157 253 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 SERPINC1P01008 464 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 CELA2BP08218 269 aaPredicted RBP15.49■□□□□ 0.07
TPM3-219ENST00000509409 SKILP12757 684 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 RGRP47804 291 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 SRP54P61011 504 aaKnown RBP15.49■□□□□ 0.07
TPM3-219ENST00000509409 POLR2LP62875 67 aaKnown RBP15.49■□□□□ 0.07
TPM3-219ENST00000509409 CXADRP78310 365 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 IL10RBQ08334 325 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 RFTN1Q14699 578 aaPredicted RBP15.49■□□□□ 0.07
TPM3-219ENST00000509409 NFATC4Q14934 902 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 ARHGAP36Q6ZRI8 547 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 GPR155Q7Z3F1 870 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 GKN2Q86XP6 184 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 WDR48Q8TAF3 677 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 GRAMD1AQ96CP6 724 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 ATXN7L3BQ96GX2 97 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 CCDC3Q9BQI4 270 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 ZWILCHQ9H900 591 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 MRPL47Q9HD33 250 aaKnown RBP15.49■□□□□ 0.07
TPM3-219ENST00000509409 THSD1Q9NS62 852 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 KLQ9UEF7 1012 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 GPR34Q9UPC5 381 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 SATB2Q9UPW6 733 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 SCINQ9Y6U3 715 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 MYLKQ15746 1914 aa15.49■□□□□ 0.07
TPM3-219ENST00000509409 A8MX80 341 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 DDX3XO00571 662 aaKnown RBP eCLIP15.48■□□□□ 0.07
TPM3-219ENST00000509409 TCEA3O75764 348 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 MMP12P39900 470 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 HCAR3P49019 387 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 ZNF165P49910 485 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 RENBPP51606 427 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 ZNF135P52742 658 aaPredicted RBP15.48■□□□□ 0.07
TPM3-219ENST00000509409 ERVPABLB-1P60509 514 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 TLE3Q04726 772 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 NSUN2Q08J23 767 aaKnown RBP eCLIP15.48■□□□□ 0.07
TPM3-219ENST00000509409 MTM1Q13496 603 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 SPIDRQ14159 915 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 ALG11Q2TAA5 492 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 AFMIDQ63HM1 303 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 LVRNQ6Q4G3 990 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 ZSWIM9Q86XI8 627 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 PSTKQ8IV42 348 aaKnown RBP15.48■□□□□ 0.07
TPM3-219ENST00000509409 ARHGAP12Q8IWW6 846 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 LZTR1Q8N653 840 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 FNIP1Q8TF40 1166 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 TRIM11Q96F44 468 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 WDR92Q96MX6 357 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 NAP1L5Q96NT1 182 aaPredicted RBP15.48■□□□□ 0.07
TPM3-219ENST00000509409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.48■□□□□ 0.07
TPM3-219ENST00000509409 CWC15Q9P013 229 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms