RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 MFN1Q8IWA4 741 aa11.04□□□□□ -0.64
SEC31A-228ENST00000509142 RNF148Q8N7C7 305 aa11.04□□□□□ -0.64
SEC31A-228ENST00000509142 SLC39A13Q96H72 371 aa11.04□□□□□ -0.64
SEC31A-228ENST00000509142 TREX1Q9NSU2 369 aa11.04□□□□□ -0.64
SEC31A-228ENST00000509142 OLA1Q9NTK5 396 aaKnown RBP11.04□□□□□ -0.64
SEC31A-228ENST00000509142 LRFN2Q9ULH4 789 aa11.04□□□□□ -0.64
SEC31A-228ENST00000509142 TMEM88BA6NKF7 163 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 TARM1B6A8C7 271 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 CCL22O00626 93 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 AURKAO14965 403 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 SYN3O14994 580 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 RTN3O95197 1032 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 ALDH2P05091 517 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 XRCC1P18887 633 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 ATP5F1P24539 256 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 PIK3R1P27986 724 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 TM4SF4P48230 202 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 NRG1Q02297 640 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 SH2D4BQ5SQS7 431 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 RBM20Q5T481 1227 aaKnown RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 MSANTD2Q6P1R3 559 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 KIAA0408Q6ZU52 694 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 PNPLA1Q8N8W4 532 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 NCSTNQ92542 709 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 HDAC10Q969S8 669 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 IMP4Q96G21 291 aaKnown RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 GCNAQ96QF7 691 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 NOL6Q9H6R4 1146 aaKnown RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 RNF186Q9NXI6 227 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 PCDHB7Q9Y5E2 793 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 MYOCOSA0A1B0GUC4 107 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 NEMP2A6NFY4 417 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 WASH4PA8MWX3 477 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 TMEM233B4DJY2 109 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 ALDH1A1P00352 501 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 SLC4A1P02730 911 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 CCDC166P0CW27 439 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 CST5P28325 142 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 HK2P52789 917 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 ART3Q13508 389 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 CEACAM7Q14002 265 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 CYLC2Q14093 348 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 TRIP4Q15650 581 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 OGFRL1Q5TC84 451 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 CCSAPQ6IQ19 270 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 KDELC1Q6UW63 502 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 TRIM67Q6ZTA4 783 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 LDB1Q86U70 411 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 KLHDC8BQ8IXV7 354 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 BLOC1S5Q8TDH9 187 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 SERPINI1Q99574 410 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 RTKNQ9BST9 563 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 STARD7Q9NQZ5 370 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 TMEM248Q9NWD8 314 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 RGSL1A5PLK6 1076 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 FAM155AB1AL88 458 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 SNUPNO95149 360 aaKnown RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 HNRNPLP14866 589 aaKnown RBP eCLIP11.03□□□□□ -0.641e-8■■■□□ 16.5
SEC31A-228ENST00000509142 PRDX6P30041 224 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 CLCN5P51795 746 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 PLK1P53350 603 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 SP3Q02447 781 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 MAP3K21Q5TCX8 1036 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 AFMIDQ63HM1 303 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 PIWIL4Q7Z3Z4 852 aaKnown RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 SATL1Q86VE3 508 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 RYBPQ8N488 228 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 GIPC2Q8TF65 315 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 IGSF8Q969P0 613 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 PHF21BQ96EK2 531 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 GBP5Q96PP8 586 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 SEMA3CQ99985 751 aa11.03□□□□□ -0.64
SEC31A-228ENST00000509142 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.03□□□□□ -0.64
SEC31A-228ENST00000509142 DNAJB1P25685 340 aa11.02□□□□□ -0.64
SEC31A-228ENST00000509142 ATXN3P54252 364 aaPredicted RBP11.02□□□□□ -0.64
SEC31A-228ENST00000509142 NKX3-2P78367 333 aa11.02□□□□□ -0.64
SEC31A-228ENST00000509142 ZNF423Q2M1K9 1284 aa11.02□□□□□ -0.64
SEC31A-228ENST00000509142 PAOXQ6QHF9 649 aa11.02□□□□□ -0.64
SEC31A-228ENST00000509142 SPON2Q9BUD6 331 aa11.02□□□□□ -0.64
SEC31A-228ENST00000509142 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.02□□□□□ -0.64
SEC31A-228ENST00000509142 SUDS3Q9H7L9 328 aaPredicted RBP11.02□□□□□ -0.64
SEC31A-228ENST00000509142 OR6C75A6NL08 312 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 TRPC5OSA6NMA1 111 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 TMEM189-UBE2V1I3L0A0 370 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 LTA4HP09960 611 aaKnown RBP11.02□□□□□ -0.65
SEC31A-228ENST00000509142 PKNOX1P55347 436 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 FOLH1Q04609 750 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 ZNF789Q5FWF6 425 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 ARTNQ5T4W7 220 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 C16orf89Q6UX73 402 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 DSELQ8IZU8 1212 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 BBS5Q8N3I7 341 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 KYQ8NBH2 561 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 RAET1EQ8TD07 263 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 EXT2Q93063 718 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 TNFRSF12AQ9NP84 129 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.02□□□□□ -0.65
SEC31A-228ENST00000509142 CRYL1Q9Y2S2 319 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 VWA7Q9Y334 891 aa11.02□□□□□ -0.65
SEC31A-228ENST00000509142 NT5C1B-RDH14C9J2C7 533 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms