RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 PACSIN1Q9BY11 444 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 FRYQ5TBA9 3013 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 CFAP69A5D8W1 941 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 SIGLEC6O43699 453 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 ELFN1P0C7U0 828 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 KRT10P13645 584 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 JUNDP17535 347 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 ITIH2P19823 946 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 IGFALSP35858 605 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 ARHGAP25P42331 645 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 BLKP51451 505 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 DUSP3P51452 185 aaPredicted RBP18.78■□□□□ 0.6
UBE3D-207ENST00000509102 MMRN1Q13201 1228 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 DPYSL3Q14195 570 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 MESDQ14696 234 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 TP53INP2Q8IXH6 220 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 PDCD6IPQ8WUM4 868 aaKnown RBP18.78■□□□□ 0.6
UBE3D-207ENST00000509102 ECHDC3Q96DC8 303 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 ZNF830Q96NB3 372 aaPredicted RBP18.78■□□□□ 0.6
UBE3D-207ENST00000509102 NUDCD1Q96RS6 583 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 SLC13A1Q9BZW2 595 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 UCKL1Q9NWZ5 548 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 NCKIPSDQ9NZQ3 722 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 SPASTQ9UBP0 616 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 ZMIZ1Q9ULJ6 1067 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 CSNK1G3Q9Y6M4 447 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 CACNA1BQ00975 2339 aa18.78■□□□□ 0.6
UBE3D-207ENST00000509102 SCAMP1O15126 338 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 MUSKO15146 869 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 JUPP14923 745 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 MX2P20592 715 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 ACP1P24666 158 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 PEX5P50542 639 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 IRF4Q15306 451 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 PROX2Q3B8N5 592 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 ANKRD20A8PQ5CZ79 823 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 SARM1Q6SZW1 724 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 MACC1Q6ZN28 852 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 NDUFAF2Q8N183 169 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 TP53I13Q8NBR0 393 aaPredicted RBP18.77■□□□□ 0.6
UBE3D-207ENST00000509102 ZNF548Q8NEK5 533 aaPredicted RBP18.77■□□□□ 0.6
UBE3D-207ENST00000509102 SLC35G2Q8TBE7 412 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 CHP1Q99653 195 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 MGME1Q9BQP7 344 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 CCDC86Q9H6F5 360 aaKnown RBP18.77■□□□□ 0.6
UBE3D-207ENST00000509102 USP29Q9HBJ7 922 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 SPTLC3Q9NUV7 552 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 APOBEC3BQ9UH17 382 aaKnown RBP18.77■□□□□ 0.6
UBE3D-207ENST00000509102 COQ6Q9Y2Z9 468 aa18.77■□□□□ 0.6
UBE3D-207ENST00000509102 TRIM38O00635 465 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 AQP9O43315 295 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 CD48P09326 243 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 IL4RP24394 825 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 GARSP41250 739 aaKnown RBP18.76■□□□□ 0.59
UBE3D-207ENST00000509102 E2F1Q01094 437 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 ITKQ08881 620 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 PAFAH1B3Q15102 231 aaKnown RBP18.76■□□□□ 0.59
UBE3D-207ENST00000509102 AGERQ15109 404 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 IFI16Q16666 785 aaKnown RBP18.76■□□□□ 0.59
UBE3D-207ENST00000509102 FAXCQ5TGI0 409 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.76■□□□□ 0.59
UBE3D-207ENST00000509102 LMX1AQ8TE12 382 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 RFFLQ8WZ73 363 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 GLMNQ92990 594 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 IL12RB2Q99665 862 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 POLR1EQ9GZS1 481 aaKnown RBP18.76■□□□□ 0.59
UBE3D-207ENST00000509102 MBNL1Q9NR56 388 aaKnown RBP18.76■□□□□ 0.59
UBE3D-207ENST00000509102 KCTD5Q9NXV2 234 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 INTUQ9ULD6 942 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 AKAP13Q12802 2813 aa18.76■□□□□ 0.59
UBE3D-207ENST00000509102 IGF2RP11717 2491 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 TRAFD1O14545 582 aaPredicted RBP18.75■□□□□ 0.59
UBE3D-207ENST00000509102 MFSD11O43934 449 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 PEX11BO96011 259 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 CPP00450 1065 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 PRKCGP05129 697 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 CES1P23141 567 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 ARSEP51690 589 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 TAS2R40P59535 323 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 PPARDQ03181 441 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 GALNT2Q10471 571 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 MTM1Q13496 603 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 ATP13A4Q4VNC1 1196 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 NCBP2-AS2Q69YL0 99 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 ZCCHC8Q6NZY4 707 aaKnown RBP18.75■□□□□ 0.59
UBE3D-207ENST00000509102 DPPA4Q7L190 304 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 ZSWIM9Q86XI8 627 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 PHACTR4Q8IZ21 702 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 PDCD7Q8N8D1 485 aaKnown RBP18.75■□□□□ 0.59
UBE3D-207ENST00000509102 PCDH19Q8TAB3 1148 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 SPOCK2Q92563 424 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 TBATAQ96M53 351 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 MAK16Q9BXY0 300 aaKnown RBP18.75■□□□□ 0.59
UBE3D-207ENST00000509102 NOD2Q9HC29 1040 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 NT5MQ9NPB1 228 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 LUC7LQ9NQ29 371 aaKnown RBP18.75■□□□□ 0.59
UBE3D-207ENST00000509102 PCDHGC4Q9Y5F7 938 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 USP24Q9UPU5 2620 aa18.75■□□□□ 0.59
UBE3D-207ENST00000509102 LRRD1A4D1F6 860 aa18.74■□□□□ 0.59
UBE3D-207ENST00000509102 K7ESM1 405 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms