RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 PEX11BO96011 259 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 HOXC4P09017 264 aaPredicted RBP13.6□□□□□ -0.23
LINC02171-201ENST00000508619 RARAP10276 462 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 C6P13671 934 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 JUNDP17535 347 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 CR2P20023 1033 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 NFKBIAP25963 317 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 RGRP47804 291 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 CDH6P55285 790 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 BCL2L1Q07817 233 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 TARDBPQ13148 414 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC02171-201ENST00000508619 MTM1Q13496 603 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 LBRQ14739 615 aaKnown RBP13.6□□□□□ -0.23
LINC02171-201ENST00000508619 WSCD2Q2TBF2 565 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 ZSCAN23Q3MJ62 389 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 TPRG1LQ5T0D9 272 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 CDCP2Q5VXM1 449 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 DPPA4Q7L190 304 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 ZSWIM9Q86XI8 627 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 CAMK1DQ8IU85 385 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 BBS5Q8N3I7 341 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 ATL2Q8NHH9 583 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 MDM1Q8TC05 714 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 FATE1Q969F0 183 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 GRAMD1AQ96CP6 724 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 APOLD1Q96LR9 279 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 MGME1Q9BQP7 344 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 NUP85Q9BW27 656 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 PCDH18Q9HCL0 1135 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 KCTD5Q9NXV2 234 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 IFNKQ9P0W0 207 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 UVRAGQ9P2Y5 699 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 APOBEC3BQ9UH17 382 aaKnown RBP13.6□□□□□ -0.23
LINC02171-201ENST00000508619 KLF15Q9UIH9 416 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 CLCA2Q9UQC9 943 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 U3KQA8 63 aa13.6□□□□□ -0.23
LINC02171-201ENST00000508619 SSU72P8A0A1W2PR75 194 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 EME2A4GXA9 379 aaPredicted RBP13.59□□□□□ -0.23
LINC02171-201ENST00000508619 FFAR2O15552 330 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 MAFKO60675 156 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 HTR1BP28222 390 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 EIF4A3P38919 411 aaKnown RBP13.59□□□□□ -0.23
LINC02171-201ENST00000508619 RPIAP49247 311 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 LIG3P49916 1009 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 CYP4F3Q08477 520 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 NFATC4Q14934 902 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 IRF4Q15306 451 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 SLC18A3Q16572 532 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 HADHQ16836 314 aaKnown RBP13.59□□□□□ -0.23
LINC02171-201ENST00000508619 SMTNL2Q2TAL5 461 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 ZNF542PQ5EBM4 170 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 LRRC73Q5JTD7 316 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 LVRNQ6Q4G3 990 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 PHACTR4Q8IZ21 702 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 FSTL5Q8N475 847 aaPredicted RBP13.59□□□□□ -0.23
LINC02171-201ENST00000508619 NETO2Q8NC67 525 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 TPCN2Q8NHX9 752 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 GLMNQ92990 594 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 NUDCD1Q96RS6 583 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 WRAP53Q9BUR4 548 aaKnown RBP13.59□□□□□ -0.23
LINC02171-201ENST00000508619 BOCQ9BWV1 1114 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 SLC13A1Q9BZW2 595 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 MBNL1Q9NR56 388 aaKnown RBP13.59□□□□□ -0.23
LINC02171-201ENST00000508619 ATRXP46100 2492 aa13.59□□□□□ -0.23
LINC02171-201ENST00000508619 PTPRQQ9UMZ3 2332 aa13.58□□□□□ -0.23
LINC02171-201ENST00000508619 LRRK1Q38SD2 2015 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 MUSKO15146 869 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 CBFA2T2O43439 604 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 OPA1O60313 960 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 MT-CO3P00414 261 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 TCF4P15884 667 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 ITIH2P19823 946 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 CASP14P31944 242 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 MAN1A1P33908 653 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 ARSEP51690 589 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 KIAA1024LP59773 190 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 PPARDQ03181 441 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 SLC10A7Q0GE19 358 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 RALGDSQ12967 914 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 ZNF235Q14590 738 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 CCDC122Q5T0U0 273 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 C6orf132Q5T0Z8 1188 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 SPECC1LQ69YQ0 1117 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 ARHGAP36Q6ZRI8 547 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 ATPAF2Q8N5M1 289 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 TEX26Q8N6G2 289 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 WDR48Q8TAF3 677 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 ZNF564Q8TBZ8 553 aaPredicted RBP13.58□□□□□ -0.24
LINC02171-201ENST00000508619 NSMCE1Q8WV22 266 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 HSPH1Q92598 858 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 NAT6Q93015 286 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 DNAJC7Q99615 494 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 IL12RB2Q99665 862 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 ZNF670Q9BS34 389 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 LRRC61Q9BV99 259 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 ETNK2Q9NVF9 386 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 AMACRQ9UHK6 382 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 RAXQ9Y2V3 346 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 DGKBQ9Y6T7 804 aa13.58□□□□□ -0.24
LINC02171-201ENST00000508619 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms