RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 OSBPL1AQ9BXW6 950 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 CPEB1Q9BZB8 566 aaKnown RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 TRIM7Q9C029 511 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 LRRC19Q9H756 370 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 POLR1BQ9H9Y6 1135 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 CPNE5Q9HCH3 593 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 GPATCH2LQ9NWQ4 482 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 IPO11Q9UI26 975 aaKnown RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 SATB2Q9UPW6 733 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 COQ6Q9Y2Z9 468 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 ENTPD2Q9Y5L3 495 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 FLNCQ14315 2725 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 COL12A1Q99715 3063 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 CDRT15L2A8MXV6 281 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 H3BM21 787 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 NTN3O00634 580 aaPredicted RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 MUSKO15146 869 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 TEX33O43247 280 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 CREB3O43889 395 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 PRAMEF11O60813 436 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 TM7SF2O76062 418 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 IGSF6O95976 241 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 ATP1A3P13637 1013 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 MMP12P39900 470 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 PAPOLAP51003 745 aaKnown RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 DUSP3P51452 185 aaPredicted RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 THOP1P52888 689 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 PCBP4P57723 403 aaKnown RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 YBEYP58557 167 aaPredicted RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 ERVPABLB-1P60509 514 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 YPEL5P62699 121 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 CXADRP78310 365 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 MAMLD1Q13495 774 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 AGERQ15109 404 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 TCEA2Q15560 299 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 UGP2Q16851 508 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 ALG11Q2TAA5 492 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 PARP15Q460N3 678 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 HS1BP3Q53T59 392 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 EFHC2Q5JST6 749 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 C6orf132Q5T0Z8 1188 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 FKBP15Q5T1M5 1219 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 E4F1Q66K89 784 aaPredicted RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 ACAD10Q6JQN1 1059 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 DNAJC24Q6P3W2 148 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 SCYL2Q6P3W7 929 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 MACC1Q6ZN28 852 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 ARHGAP36Q6ZRI8 547 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 GPR155Q7Z3F1 870 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 B3GNT8Q7Z7M8 397 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 CAMK1DQ8IU85 385 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 PELI3Q8N2H9 469 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 NPWQ8N729 165 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 PLA2G15Q8NCC3 412 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 TSEN2Q8NCE0 465 aaKnown RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 LSM14AQ8ND56 463 aaKnown RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 ZNF248Q8NDW4 579 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 NEK11Q8NG66 645 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 HCAR2Q8TDS4 363 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 SNRNP27Q8WVK2 155 aaKnown RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 CASKIN2Q8WXE0 1202 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 TSACCQ96A04 125 aaPredicted RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 ARHGEF26Q96DR7 871 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 CELF6Q96J87 481 aaKnown RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 VCPIP1Q96JH7 1222 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 TBATAQ96M53 351 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 LGMNQ99538 433 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 SELENOOQ9BVL4 669 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 SEMA4CQ9C0C4 833 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 SLC39A8Q9C0K1 460 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 ABCG4Q9H172 646 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 SUV39H2Q9H5I1 410 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 PCDH12Q9NPG4 1184 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 SPASTQ9UBP0 616 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 APOBEC3BQ9UH17 382 aaKnown RBP6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 HPCAL4Q9UM19 191 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 DAAM1Q9Y4D1 1078 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 MAST4O15021 2626 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 HECTD1Q9ULT8 2610 aa6.49□□□□□ -1.37
HMGN1P16-201ENST00000508308 UBR5O95071 2799 aaPredicted RBP6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 TEX51A0A1B0GUA7 166 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 A0A1W2PQM1 296 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 TMEM202A6NGA9 273 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 TMEM191CA6NGB0 347 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 RNF223E7ERA6 249 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 TRAFD1O14545 582 aaPredicted RBP6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 EFSO43281 561 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 TCEA3O75764 348 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 PEX11BO96011 259 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 FUCA1P04066 466 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 C6P13671 934 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 TCF4P15884 667 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 CSNK1DP48730 415 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 LIG3P49916 1009 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 PEX5P50542 639 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 HK3P52790 923 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 NDST2P52849 883 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 MYL5Q02045 173 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 PPARDQ03181 441 aa6.48□□□□□ -1.37
HMGN1P16-201ENST00000508308 UBXN1Q04323 297 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms