RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 FERMT1Q9BQL6 677 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 GTPBP2Q9BX10 602 aaKnown RBP20.02■□□□□ 0.8
SNX25-204ENST00000506896 PCDHGC4Q9Y5F7 938 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 PLXNA2O75051 1894 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 PRAMEF26H0Y7S4 382 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 ATXN3P54252 364 aaPredicted RBP20.01■□□□□ 0.79
SNX25-204ENST00000506896 CCDC173Q0VFZ6 552 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 GRIK2Q13002 908 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 ZBTB17Q13105 803 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 NOMO1Q15155 1222 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 RPS6KA1Q15418 735 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 PIP4P1Q86T03 277 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 ZC3H18Q86VM9 953 aaKnown RBP20.01■□□□□ 0.79
SNX25-204ENST00000506896 TTC13Q8NBP0 860 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 OR2I1PQ8NGU4 316 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 ASB12Q8WXK4 309 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 HAUS1Q96CS2 278 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 QKIQ96PU8 341 aaKnown RBP eCLIP20.01■□□□□ 0.792e-6■■■■□ 22.3
SNX25-204ENST00000506896 VAT1Q99536 393 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 EBF2Q9HAK2 575 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 PCDH12Q9NPG4 1184 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 SEPT10Q9P0V9 454 aa20.01■□□□□ 0.79
SNX25-204ENST00000506896 ZFR2Q9UPR6 939 aaKnown RBP20.01■□□□□ 0.79
SNX25-204ENST00000506896 ANKRD36A6QL64 1941 aa20■□□□□ 0.79
SNX25-204ENST00000506896 TTC24A2A3L6 582 aaPredicted RBP20■□□□□ 0.79
SNX25-204ENST00000506896 SPINT1O43278 529 aa20■□□□□ 0.79
SNX25-204ENST00000506896 OPHN1O60890 802 aa20■□□□□ 0.79
SNX25-204ENST00000506896 AKT2P31751 481 aa20■□□□□ 0.79
SNX25-204ENST00000506896 DSC2Q02487 901 aa20■□□□□ 0.79
SNX25-204ENST00000506896 SGCGQ13326 291 aa20■□□□□ 0.79
SNX25-204ENST00000506896 ZNF211Q13398 564 aaPredicted RBP20■□□□□ 0.79
SNX25-204ENST00000506896 TMEM52BQ4KMG9 183 aa20■□□□□ 0.79
SNX25-204ENST00000506896 TEX44Q53QW1 395 aa20■□□□□ 0.79
SNX25-204ENST00000506896 ARMC12Q5T9G4 340 aa20■□□□□ 0.79
SNX25-204ENST00000506896 N4BP2L1Q5TBK1 243 aaPredicted RBP20■□□□□ 0.79
SNX25-204ENST00000506896 SEL1L2Q5TEA6 688 aa20■□□□□ 0.79
SNX25-204ENST00000506896 SEL1L3Q68CR1 1132 aa20■□□□□ 0.79
SNX25-204ENST00000506896 AADACL2Q6P093 401 aa20■□□□□ 0.79
SNX25-204ENST00000506896 IL27RAQ6UWB1 636 aa20■□□□□ 0.79
SNX25-204ENST00000506896 ADAT2Q7Z6V5 191 aaKnown RBP20■□□□□ 0.79
SNX25-204ENST00000506896 ZSWIM9Q86XI8 627 aa20■□□□□ 0.79
SNX25-204ENST00000506896 CNTD1Q8N815 330 aa20■□□□□ 0.79
SNX25-204ENST00000506896 ARRDC2Q8TBH0 407 aa20■□□□□ 0.79
SNX25-204ENST00000506896 CXorf40AQ8TE69 158 aa20■□□□□ 0.79
SNX25-204ENST00000506896 PDCD6IPQ8WUM4 868 aaKnown RBP20■□□□□ 0.79
SNX25-204ENST00000506896 NSMCE3Q96MG7 304 aa20■□□□□ 0.79
SNX25-204ENST00000506896 SLC6A18Q96N87 628 aa20■□□□□ 0.79
SNX25-204ENST00000506896 HERPUD2Q9BSE4 406 aa20■□□□□ 0.79
SNX25-204ENST00000506896 SLC17A9Q9BYT1 436 aa20■□□□□ 0.79
SNX25-204ENST00000506896 CARD9Q9H257 536 aa20■□□□□ 0.79
SNX25-204ENST00000506896 AASDHPPTQ9NRN7 309 aa20■□□□□ 0.79
SNX25-204ENST00000506896 PHTF1Q9UMS5 762 aa20■□□□□ 0.79
SNX25-204ENST00000506896 ITM2BQ9Y287 266 aa20■□□□□ 0.79
SNX25-204ENST00000506896 RAI2Q9Y5P3 530 aa20■□□□□ 0.79
SNX25-204ENST00000506896 TMEM131Q92545 1883 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 CFAP69A5D8W1 941 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 RIOK3O14730 519 aaKnown RBP19.99■□□□□ 0.79
SNX25-204ENST00000506896 GIPC1O14908 333 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 VILLO15195 856 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 PGLSO95336 258 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 CPP00450 1065 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 CEACAM1P13688 526 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 CD59P13987 128 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 HNRNPA2B1P22626 353 aaKnown RBP19.99■□□□□ 0.79
SNX25-204ENST00000506896 CD38P28907 300 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 MMP12P39900 470 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 CSNK1EP49674 416 aaKnown RBP19.99■□□□□ 0.79
SNX25-204ENST00000506896 OTUD4Q01804 1114 aaKnown RBP19.99■□□□□ 0.79
SNX25-204ENST00000506896 OVGP1Q12889 678 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 TRAF2Q12933 501 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 STAT4Q14765 748 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 PSAPL1Q6NUJ1 521 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 IQCHQ86VS3 1027 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 CDKL3Q8IVW4 592 aaPredicted RBP19.99■□□□□ 0.79
SNX25-204ENST00000506896 NDUFAF2Q8N183 169 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 FAM174AQ8TBP5 190 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 ACTL9Q8TC94 416 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 HTR3CQ8WXA8 447 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 AGAP3Q96P47 875 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 C1QTNF7Q9BXJ2 289 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 C1QTNF2Q9BXJ5 285 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 GGT7Q9UJ14 662 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 PCDHB9Q9Y5E1 797 aa19.99■□□□□ 0.79
SNX25-204ENST00000506896 TRPM6Q9BX84 2022 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 IGLON5A6NGN9 336 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 H7C0C1 242 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 SLC31A1O15431 190 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 MAGEC1O60732 1142 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 PTPN3P26045 913 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 ATP5OP48047 213 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 EIF3EP60228 445 aaKnown RBP19.98■□□□□ 0.79
SNX25-204ENST00000506896 RPL26P61254 145 aaKnown RBP19.98■□□□□ 0.79
SNX25-204ENST00000506896 SLC14A1Q13336 389 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 KLF1Q13351 362 aaPredicted RBP19.98■□□□□ 0.79
SNX25-204ENST00000506896 SLC14A2Q15849 920 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 LRRC73Q5JTD7 316 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 MFSD2AQ8NA29 543 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 TMEM145Q8NBT3 493 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 DENND6BQ8NEG7 585 aa19.98■□□□□ 0.79
SNX25-204ENST00000506896 TEKT5Q96M29 485 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms