RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CAMK1DQ8IU85 385 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 CCDC13Q8IYE1 715 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 ZCCHC9Q8N567 271 aaKnown RBP7.34□□□□□ -1.23
GYPB-206ENST00000506516 LRRC57Q8N9N7 239 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 KRT35Q92764 455 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 P3H4Q92791 437 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 NUDCD1Q96RS6 583 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 POLR1EQ9GZS1 481 aaKnown RBP7.34□□□□□ -1.23
GYPB-206ENST00000506516 SMOC1Q9H4F8 434 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 ZFAND3Q9H8U3 227 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 NT5MQ9NPB1 228 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 RBM22Q9NW64 420 aaKnown RBP eCLIP7.34□□□□□ -1.23
GYPB-206ENST00000506516 LHX3Q9UBR4 397 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 GUCA1BQ9UMX6 200 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 DMTF1Q9Y222 760 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 EFR3BQ9Y2G0 817 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 FADS3Q9Y5Q0 445 aa7.34□□□□□ -1.23
GYPB-206ENST00000506516 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.34□□□□□ -1.23
GYPB-206ENST00000506516 MYO18AQ92614 2054 aaKnown RBP7.34□□□□□ -1.23
GYPB-206ENST00000506516 DOCK4Q8N1I0 1966 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.33□□□□□ -1.24
GYPB-206ENST00000506516 GOLGA6L9A6NEM1 432 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 PATE3B3GLJ2 98 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 PRAMEF26H0Y7S4 382 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 RNF103O00237 685 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 TJP3O95049 919 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 MAP3K6O95382 1288 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 PIGNO95427 931 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 PAK4O96013 591 aaPredicted RBP7.33□□□□□ -1.24
GYPB-206ENST00000506516 JCHAINP01591 159 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 ENGP17813 658 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 CA4P22748 312 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 CD38P28907 300 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 MAT2AP31153 395 aaKnown RBP7.33□□□□□ -1.24
GYPB-206ENST00000506516 RGRP47804 291 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 PEX5P50542 639 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 GDF10P55107 478 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 CCZ1BP86790 482 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 CCZ1P86791 482 aaPredicted RBP7.33□□□□□ -1.24
GYPB-206ENST00000506516 PPIDQ08752 370 aaKnown RBP7.33□□□□□ -1.24
GYPB-206ENST00000506516 CBLBQ13191 982 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 LLGL1Q15334 1064 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 UGP2Q16851 508 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 SWI5Q1ZZU3 235 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 IL27RAQ6UWB1 636 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 PARS2Q7L3T8 475 aaKnown RBP7.33□□□□□ -1.24
GYPB-206ENST00000506516 HORMAD1Q86X24 394 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 NDUFAF2Q8N183 169 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.33□□□□□ -1.24
GYPB-206ENST00000506516 NETO1Q8TDF5 533 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 CXorf40AQ8TE69 158 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 PDCD6IPQ8WUM4 868 aaKnown RBP7.33□□□□□ -1.24
GYPB-206ENST00000506516 TFB1MQ8WVM0 346 aaKnown RBP7.33□□□□□ -1.24
GYPB-206ENST00000506516 MAML1Q92585 1016 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 HPS1Q92902 700 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 SERAC1Q96JX3 654 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 ALS2CR12Q96Q35 445 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 LGMNQ99538 433 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 FERMT1Q9BQL6 677 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 MGME1Q9BQP7 344 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 EDEM2Q9BV94 578 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 GTPBP2Q9BX10 602 aaKnown RBP7.33□□□□□ -1.24
GYPB-206ENST00000506516 HEMGNQ9BXL5 484 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 SLC17A9Q9BYT1 436 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 OSBPL8Q9BZF1 889 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 NOD2Q9HC29 1040 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 TM9SF3Q9HD45 589 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 TMEM9BQ9NQ34 198 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 LZTFL1Q9NQ48 299 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 AASDHPPTQ9NRN7 309 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 TRIM10Q9UDY6 481 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 TTLL3Q9Y4R7 772 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 CKAP5Q14008 2032 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 FANCMQ8IYD8 2048 aa7.33□□□□□ -1.24
GYPB-206ENST00000506516 ZFHX2Q9C0A1 2572 aaPredicted RBP7.33□□□□□ -1.24
GYPB-206ENST00000506516 hCG_1818297A0A087WSY0 165 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 A0A0U1RQJ8 604 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 LNP1A1A4G5 178 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 CFAP69A5D8W1 941 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 HACD1B0YJ81 288 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 TMEM229AB2RXF0 380 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 APOC4-APOC2K7ER74 178 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 TLR4O00206 839 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 MUSKO15146 869 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 VILLO15195 856 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 SLC31A1O15431 190 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 ZSCAN12O43309 604 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 MTSS1O43312 755 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 LATO43561 262 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 DFNA5O60443 496 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 SOCS5O75159 536 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 ZNF189O75820 626 aaPredicted RBP7.32□□□□□ -1.24
GYPB-206ENST00000506516 TM7SF2O76062 418 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 FTCDO95954 541 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 APOC2P02655 101 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 PYGMP11217 842 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 CR2P20023 1033 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 HNRNPA2B1P22626 353 aaKnown RBP7.32□□□□□ -1.24
GYPB-206ENST00000506516 AKT2P31751 481 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 GRIA4P48058 902 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms