RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PTPRUQ92729 1446 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 GCC2Q8IWJ2 1684 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 CYP2D7A0A087X1C5 515 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 DPPA5A6NC42 116 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 A8MZ25 164 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 BTBD18B2RXH4 712 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 SMIM22K7EJ46 135 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 SNAP23O00161 211 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 SH2B2O14492 632 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 SCAMP1O15126 338 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 NARSO43776 548 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 OR2C1O95371 312 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 PLAUP00749 431 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 TFP02787 698 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 HOXB5P09067 269 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 PRR35P0CG20 571 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 PCNAP12004 261 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 KRT10P13645 584 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 GPD1P21695 349 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 HOXA7P31268 230 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 CDAP32320 146 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 MCM7P33993 719 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 COPB2P35606 906 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 LMAN1P49257 510 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 CLCNKBP51801 687 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 EFNA5P52803 228 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 CACNA2D1P54289 1103 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC12A2P55011 1212 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 CEBPZQ03701 1054 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 CDC16Q13042 620 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 OLIG2Q13516 323 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 IRF3Q14653 427 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 RASA2Q15283 850 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZSCAN23Q3MJ62 389 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 ALDH1L2Q3SY69 923 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 KIAA1755Q5JYT7 1200 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 MEX3CQ5U5Q3 659 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 GKAP1Q5VSY0 366 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 SUMO4Q6EEV6 95 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 HMBOX1Q6NT76 420 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 LRIG3Q6UXM1 1119 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 CHSY1Q86X52 802 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 PNLDC1Q8NA58 520 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 POC5Q8NA72 575 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 BCAS4Q8TDM0 211 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 MMABQ96EY8 250 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 RITA1Q96K30 269 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 CNDP2Q96KP4 475 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 C1orf74Q96LT6 269 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZMAT2Q96NC0 199 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 GLIS2Q9BZE0 524 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 SCAND2PQ9GZW5 306 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 ACTR5Q9H9F9 607 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 KIF9Q9HAQ2 790 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZCCHC17Q9NP64 241 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 IL17RBQ9NRM6 502 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC6A13Q9NSD5 602 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 MRPL15Q9P015 296 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 CTNNAL1Q9UBT7 734 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 GIMAP2Q9UG22 337 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 ADAM21Q9UKJ8 722 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZHX1Q9UKY1 873 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 CARD8Q9Y2G2 431 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 WNT6Q9Y6F9 365 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 UTYO14607 1347 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 ADGRF5Q8IZF2 1346 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 UNC13BO14795 1591 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 JCADQ9P266 1359 aa3.37□□□□□ -1.87
TRAPPC11-205ENST00000506426 KDM5AP29375 1690 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 RPRD2Q5VT52 1461 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 ASXL1Q8IXJ9 1541 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 A0A1W2PQF6 199 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC22A23A1A5C7 686 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TYW5A2RUC4 315 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 CBY3A6NI87 242 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TSPY2A6NKD2 308 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 A8MV72 311 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 H7C0S8 307 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 MASP2O00187 686 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 RNMTO43148 476 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 SEC14L5O43304 696 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC25A17O43808 307 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 ENTPD3O75355 529 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 NDUFS3O75489 264 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC25A12O75746 678 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 NEURL1O76050 574 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TMCC1O94876 653 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 MT-CYBP00156 380 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 RB1P06400 928 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TSPY3P0CV98 308 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TSPY8P0CW00 308 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 CYP2A6P11509 494 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TMEM11P17152 192 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 DPP6P42658 865 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 MRPL12P52815 198 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 RRP1P56182 461 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 HDAC4P56524 1084 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 HSF1Q00613 529 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TSPY1Q01534 308 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms